RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 A0A1W2PQF6 199 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 YJEFN3A6XGL0 299 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 E7ENQ6 273 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 MED7O43513 233 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 DAOAP59103 153 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 PKDCCQ504Y2 493 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 NUGGCQ68CJ6 796 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 RRAGAQ7L523 313 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 TMEM139Q8IV31 216 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 TMEFF1Q8IYR6 380 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 SLC35F5Q8WV83 523 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 EDEM1Q92611 657 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 PANX2Q96RD6 677 aa21.32■■□□□ 1
PTPRU-203ENST00000415600 IRX2Q9BZI1 471 aaPredicted RBP21.32■■□□□ 1
PTPRU-203ENST00000415600 LNP1A1A4G5 178 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 NDUFS2O75306 463 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 GYPCP04921 128 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 TPM1P09493 284 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 KRT5P13647 590 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 SLC11A2P49281 568 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 ADKP55263 362 aaKnown RBP21.31■■□□□ 1
PTPRU-203ENST00000415600 ADGRF1Q5T601 910 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 CNGA4Q8IV77 575 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 FAM217AQ8IXS0 508 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 LMO3Q8TAP4 145 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 TFAP2BQ92481 460 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 ACOX2Q99424 681 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 DDX50Q9BQ39 737 aaKnown RBP21.31■■□□□ 1
PTPRU-203ENST00000415600 LSM14BQ9BX40 385 aaKnown RBP21.31■■□□□ 1
PTPRU-203ENST00000415600 RXFP3Q9NSD7 469 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 STON1Q9Y6Q2 735 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 MFAP3LO75121 409 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 BRD2P25440 801 aaKnown RBP21.31■■□□□ 1
PTPRU-203ENST00000415600 ACADSBP45954 432 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 RGS7P49802 495 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 VWA3BQ502W6 1294 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 TRIM61Q5EBN2 209 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 ARMCX6Q7L4S7 300 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 NDRG1Q92597 394 aaKnown RBP21.31■■□□□ 1
PTPRU-203ENST00000415600 TMA16Q96EY4 203 aaKnown RBP21.31■■□□□ 1
PTPRU-203ENST00000415600 ERGIC2Q96RQ1 377 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 CIPCQ9C0C6 399 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 INTS2Q9H0H0 1204 aaKnown RBP21.31■■□□□ 1
PTPRU-203ENST00000415600 ELOVL2Q9NXB9 296 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 THAP10Q9P2Z0 257 aaPredicted RBP21.31■■□□□ 1
PTPRU-203ENST00000415600 SFMBT1Q9UHJ3 866 aa21.31■■□□□ 1
PTPRU-203ENST00000415600 MBD1Q9UIS9 605 aaPredicted RBP21.31■■□□□ 1
PTPRU-203ENST00000415600 NUP205Q92621 2012 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 TPRP12270 2363 aaKnown RBP21.3■■□□□ 1
PTPRU-203ENST00000415600 TYW5A2RUC4 315 aaKnown RBP21.3■■□□□ 1
PTPRU-203ENST00000415600 C4orf47A7E2U8 309 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 PES1O00541 588 aaKnown RBP21.3■■□□□ 1
PTPRU-203ENST00000415600 ARHGAP6O43182 974 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 LTFP02788 710 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 NDUFV2P19404 249 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 CASP14P31944 242 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 MEA1Q16626 185 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 FKBP15Q5T1M5 1219 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 PMF1Q6P1K2 205 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 MSANTD2Q6P1R3 559 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 KIAA1324Q6UXG2 1013 aaKnown RBP21.3■■□□□ 1
PTPRU-203ENST00000415600 BHLHA9Q7RTU4 235 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 WFIKKN2Q8TEU8 576 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 FOXJ1Q92949 421 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 BAG1Q99933 345 aaPredicted RBP21.3■■□□□ 1
PTPRU-203ENST00000415600 STOML2Q9UJZ1 356 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 HCN2Q9UL51 889 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 CYP8B1Q9UNU6 501 aa21.3■■□□□ 1
PTPRU-203ENST00000415600 TM4SF5O14894 197 aa21.29■■□□□ 1
PTPRU-203ENST00000415600 IRAK2O43187 625 aa21.29■■□□□ 1
PTPRU-203ENST00000415600 PTGER3P43115 390 aa21.29■■□□□ 1
PTPRU-203ENST00000415600 ATXN3P54252 364 aaPredicted RBP21.29■■□□□ 1
PTPRU-203ENST00000415600 SYCP2LQ5T4T6 812 aa21.29■■□□□ 1
PTPRU-203ENST00000415600 CCDC117Q8IWD4 279 aaPredicted RBP21.29■■□□□ 1
PTPRU-203ENST00000415600 PIWIL1Q96J94 861 aaKnown RBP21.29■■□□□ 1
PTPRU-203ENST00000415600 MRGPRX1Q96LB2 322 aa21.29■■□□□ 1
PTPRU-203ENST00000415600 NDST4Q9H3R1 872 aa21.29■■□□□ 1
PTPRU-203ENST00000415600 PRDM16Q9HAZ2 1276 aa21.29■■□□□ 1
PTPRU-203ENST00000415600 UBE2TQ9NPD8 197 aaPredicted RBP21.29■■□□□ 1
PTPRU-203ENST00000415600 ST7Q9NRC1 585 aa21.29■■□□□ 1
PTPRU-203ENST00000415600 PLA2G4CQ9UP65 541 aa21.29■■□□□ 1
PTPRU-203ENST00000415600 FECHP22830 423 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 RING1Q06587 406 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 GEN1Q17RS7 908 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 DUOXA1Q1HG43 343 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 SMYD5Q6GMV2 418 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 KIAA1211LQ6NV74 962 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 METTL3Q86U44 580 aaKnown RBP21.28■■□□□ 1
PTPRU-203ENST00000415600 ARHGEF19Q8IW93 802 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 CCAR2Q8N163 923 aaKnown RBP21.28■■□□□ 1
PTPRU-203ENST00000415600 KAT5Q92993 513 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 SERPINB11Q96P15 392 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 NUP58Q9BVL2 599 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 NAA15Q9BXJ9 866 aaKnown RBP21.28■■□□□ 1
PTPRU-203ENST00000415600 RAD54BQ9Y620 910 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 PLXND1Q9Y4D7 1925 aa21.28■■□□□ 1
PTPRU-203ENST00000415600 IGHV1OR15-9A0A0B4J2B8 117 aa21.27■■□□□ 1
PTPRU-203ENST00000415600 RNF225M0QZC1 329 aaPredicted RBP21.27■■□□□ 1
PTPRU-203ENST00000415600 CFIP05156 583 aa21.27■■□□□ 1
PTPRU-203ENST00000415600 OXTRP30559 389 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms