RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 HMBSP08397 361 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 ADH5P11766 374 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 PSMA2P25787 234 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 ARHGAP25P42331 645 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 VAV2P52735 878 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 ZNF135P52742 658 aaPredicted RBP12.35□□□□□ -0.43
ATG4B-207ENST00000415107 ATP11AP98196 1134 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 NME3Q13232 169 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 ARL13BQ3SXY8 428 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 PREPLQ4J6C6 727 aaPredicted RBP12.35□□□□□ -0.43
ATG4B-207ENST00000415107 MPPE1Q53F39 396 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 MS4A13Q5J8X5 152 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 LY6G5CQ5SRR4 150 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 PIK3R6Q5UE93 754 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 NADSYN1Q6IA69 706 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 ZNF662Q6ZS27 426 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 TRIM67Q6ZTA4 783 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 PHLDB2Q86SQ0 1253 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 ZNF683Q8IZ20 524 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 NELL2Q99435 816 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 SLC2A11Q9BYW1 496 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 TKTL2Q9H0I9 626 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 OSBPL2Q9H1P3 480 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 HEBP1Q9NRV9 189 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 MYO1AQ9UBC5 1043 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 ANAPC7Q9UJX3 599 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 REXO2Q9Y3B8 237 aaKnown RBP12.35□□□□□ -0.43
ATG4B-207ENST00000415107 PCDHA13Q9Y5I0 950 aa12.35□□□□□ -0.43
ATG4B-207ENST00000415107 A0A0A0MRY4 1105 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 KRBA1A5PL33 1030 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-207ENST00000415107 LRCH4O75427 683 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 PAGE1O75459 146 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 RNF8O76064 485 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 CYBBP04839 570 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 SLC6A4P31645 630 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 HTR7P34969 479 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 ADRA1BP35368 520 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 ATXN1P54253 815 aaKnown RBP12.34□□□□□ -0.43
ATG4B-207ENST00000415107 CCZ1BP86790 482 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 CCZ1P86791 482 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-207ENST00000415107 CDO1Q16878 200 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 ARTNQ5T4W7 220 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 SH3PXD2AQ5TCZ1 1133 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 MANEALQ5VSG8 457 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 FAM131BQ86XD5 332 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 ZNF687Q8N1G0 1237 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 ARFGAP1Q8N6T3 406 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 HJURPQ8NCD3 748 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-207ENST00000415107 PRICKLE1Q96MT3 831 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-207ENST00000415107 TRIM7Q9C029 511 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 ANLNQ9NQW6 1124 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 CTTNBP2NLQ9P2B4 639 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 PPARGC1AQ9UBK2 798 aaKnown RBP12.34□□□□□ -0.43
ATG4B-207ENST00000415107 SLC27A6Q9Y2P4 619 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 MRPS17Q9Y2R5 130 aaKnown RBP12.34□□□□□ -0.43
ATG4B-207ENST00000415107 HS3ST4Q9Y661 456 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 F5P12259 2224 aa12.34□□□□□ -0.43
ATG4B-207ENST00000415107 TRIOO75962 3097 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 KANSL1LA0AUZ9 987 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 FAM170AA1A519 330 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 TYW5A2RUC4 315 aaKnown RBP12.33□□□□□ -0.44
ATG4B-207ENST00000415107 F5H5T6 163 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 PROSCO94903 275 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 TYRP14679 529 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 TACR2P21452 398 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 HOXD9P28356 352 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-207ENST00000415107 HOXC13P31276 330 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 OPRD1P41143 372 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 SEMA3BQ13214 749 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 TMEM196Q5HYL7 178 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 IER5LQ5T953 404 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 ZNF852Q6ZMS4 543 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 TPRG1Q6ZUI0 275 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 CHST9Q7L1S5 443 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 TMEM25Q86YD3 366 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 PHTF2Q8N3S3 785 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 SYNPOQ8N3V7 929 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.33□□□□□ -0.44
ATG4B-207ENST00000415107 SLC35G2Q8TBE7 412 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 TEKT4Q8WW24 435 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 RNF34Q969K3 372 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 P2RY11Q96G91 374 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 XPO6Q96QU8 1125 aaKnown RBP12.33□□□□□ -0.44
ATG4B-207ENST00000415107 IER2Q9BTL4 223 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 BBS2Q9BXC9 721 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 XPO7Q9UIA9 1087 aaKnown RBP12.33□□□□□ -0.44
ATG4B-207ENST00000415107 FBXL21Q9UKT6 434 aa12.33□□□□□ -0.44
ATG4B-207ENST00000415107 SYNJ2BP-COX16A0A087WUM0 186 aa12.32□□□□□ -0.44
ATG4B-207ENST00000415107 A0A1B0GVM2 712 aa12.32□□□□□ -0.44
ATG4B-207ENST00000415107 TCAF2A6NFQ2 919 aa12.32□□□□□ -0.44
ATG4B-207ENST00000415107 DRGXA6NNA5 263 aa12.32□□□□□ -0.44
ATG4B-207ENST00000415107 SCAMP3O14828 347 aaKnown RBP12.32□□□□□ -0.44
ATG4B-207ENST00000415107 MOCS2O96007 188 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-207ENST00000415107 DRD1P21728 446 aa12.32□□□□□ -0.44
ATG4B-207ENST00000415107 MIPP30301 263 aa12.32□□□□□ -0.44
ATG4B-207ENST00000415107 L1CAMP32004 1257 aa12.32□□□□□ -0.44
ATG4B-207ENST00000415107 SLC1A1P43005 524 aa12.32□□□□□ -0.44
ATG4B-207ENST00000415107 MAGEA9P43362 315 aa12.32□□□□□ -0.44
ATG4B-207ENST00000415107 SLC25A11Q02978 314 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms