RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 HLA-EP13747 358 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 POLR2EP19388 210 aaKnown RBP17.47■□□□□ 0.39
COL6A2-205ENST00000413758 CD6P30203 668 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 HLA-FP30511 346 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
COL6A2-205ENST00000413758 SGSHP51688 502 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 GFPT1Q06210 699 aaPredicted RBP17.47■□□□□ 0.39
COL6A2-205ENST00000413758 RING1Q06587 406 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 SYCP2LQ5T4T6 812 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 N4BP2L1Q5TBK1 243 aaPredicted RBP17.47■□□□□ 0.39
COL6A2-205ENST00000413758 PIK3R6Q5UE93 754 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 TMEM215Q68D42 235 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 PSAPL1Q6NUJ1 521 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 RABEPKQ7Z6M1 372 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 AHI1Q8N157 1196 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 HJURPQ8NCD3 748 aaPredicted RBP17.47■□□□□ 0.39
COL6A2-205ENST00000413758 STK32AQ8WU08 396 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 MED15Q96RN5 788 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 MKRN2Q9H000 416 aaKnown RBP17.47■□□□□ 0.39
COL6A2-205ENST00000413758 DACH1Q9UI36 760 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 SLC6A14Q9UN76 642 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 TLR6Q9Y2C9 796 aa17.47■□□□□ 0.39
COL6A2-205ENST00000413758 NCOR2Q9Y618 2525 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 E5RJQ4 531 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 IRAK2O43187 625 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 IGLV3-27P01718 113 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 APOEP02649 317 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 ATP5BP06576 529 aaKnown RBP17.46■□□□□ 0.39
COL6A2-205ENST00000413758 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
COL6A2-205ENST00000413758 ENGP17813 658 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 SLC6A4P31645 630 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 HOXD12P35452 270 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 HSP90AA4PQ58FG1 418 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 MBLAC2Q68D91 279 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 SLC23A3Q6PIS1 610 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 TAC4Q86UU9 113 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 PASD1Q8IV76 773 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 SLC41A1Q8IVJ1 513 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 MFN1Q8IWA4 741 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 CARNMT1Q8N4J0 409 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 ZNF366Q8N895 744 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 FOXJ1Q92949 421 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 TOE1Q96GM8 510 aaKnown RBP17.46■□□□□ 0.39
COL6A2-205ENST00000413758 FCRL2Q96LA5 508 aaPredicted RBP17.46■□□□□ 0.39
COL6A2-205ENST00000413758 CNTNAP3BQ96NU0 1288 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 GPR174Q9BXC1 333 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 SLC4A5Q9BY07 1137 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 CNTNAP3Q9BZ76 1288 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 NUP62CLQ9H1M0 184 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 THAP9Q9H5L6 903 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 FSCN3Q9NQT6 498 aa17.46■□□□□ 0.39
COL6A2-205ENST00000413758 TNRC6BQ9UPQ9 1833 aaKnown RBP17.45■□□□□ 0.38
COL6A2-205ENST00000413758 SYNJ2BP-COX16A0A087WUM0 186 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 CDX4O14627 284 aaPredicted RBP17.45■□□□□ 0.38
COL6A2-205ENST00000413758 PAPSS1O43252 624 aaPredicted RBP17.45■□□□□ 0.38
COL6A2-205ENST00000413758 FYNP06241 537 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 PON1P27169 355 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 PTK2Q05397 1052 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 PDCLQ13371 301 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 ENPP2Q13822 863 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 MEA1Q16626 185 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 MAN2A1Q16706 1144 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 FAM133BQ5BKY9 247 aaKnown RBP17.45■□□□□ 0.38
COL6A2-205ENST00000413758 WDR45BQ5MNZ6 344 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 SH3PXD2AQ5TCZ1 1133 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 SYPL2Q5VXT5 272 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 FAM124AQ86V42 546 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 IRF2BP1Q8IU81 584 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 ZNF557Q8N988 423 aaPredicted RBP17.45■□□□□ 0.38
COL6A2-205ENST00000413758 AZIN2Q96A70 460 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 NOX5Q96PH1 765 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 POPDC2Q9HBU9 364 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 ITM2CQ9NQX7 267 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 COX16Q9P0S2 106 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 CYTH4Q9UIA0 394 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 DNAJC12Q9UKB3 198 aa17.45■□□□□ 0.38
COL6A2-205ENST00000413758 DNAH14Q0VDD8 3507 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 GTPBP10A4D1E9 387 aaKnown RBP17.44■□□□□ 0.38
COL6A2-205ENST00000413758 BECN2A8MW95 431 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 SERPINF2P08697 491 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 GNSP15586 552 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 OXTRP30559 389 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 CD70P32970 193 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 KRT9P35527 623 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 RPL34P49207 117 aaKnown RBP17.44■□□□□ 0.38
COL6A2-205ENST00000413758 TPMTP51580 245 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 RPS24P62847 133 aaKnown RBP17.44■□□□□ 0.38
COL6A2-205ENST00000413758 YWHAZP63104 245 aaKnown RBP17.44■□□□□ 0.38
COL6A2-205ENST00000413758 NNTQ13423 1086 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 CDH18Q13634 790 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 PLEKHG6Q3KR16 790 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 DPCR1Q3MIW9 517 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 ZC3H12AQ5D1E8 599 aaKnown RBP17.44■□□□□ 0.38
COL6A2-205ENST00000413758 MPP7Q5T2T1 576 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 NADSYN1Q6IA69 706 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 TMEM110Q86TL2 294 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 METTL3Q86U44 580 aaKnown RBP17.44■□□□□ 0.38
COL6A2-205ENST00000413758 ADIPOR2Q86V24 386 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 LGI2Q8N0V4 545 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 HDDC3Q8N4P3 179 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms