RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NASPP49321 788 aaPredicted RBP10□□□□□ -0.81
RFFL-203ENST00000413582 AP3M2P53677 418 aa10□□□□□ -0.81
RFFL-203ENST00000413582 BCAT1P54687 386 aa10□□□□□ -0.81
RFFL-203ENST00000413582 RPS14P62263 151 aaKnown RBP10□□□□□ -0.81
RFFL-203ENST00000413582 COG7P83436 770 aa10□□□□□ -0.81
RFFL-203ENST00000413582 ARID5AQ03989 594 aa10□□□□□ -0.81
RFFL-203ENST00000413582 ZBTB16Q05516 673 aa10□□□□□ -0.81
RFFL-203ENST00000413582 INCA1Q0VD86 236 aa10□□□□□ -0.81
RFFL-203ENST00000413582 EFEMP1Q12805 493 aa10□□□□□ -0.81
RFFL-203ENST00000413582 TARDBPQ13148 414 aaKnown RBP eCLIP10□□□□□ -0.81
RFFL-203ENST00000413582 SHBQ15464 509 aa10□□□□□ -0.81
RFFL-203ENST00000413582 ZACNQ401N2 412 aa10□□□□□ -0.81
RFFL-203ENST00000413582 FNDC3BQ53EP0 1204 aaKnown RBP10□□□□□ -0.81
RFFL-203ENST00000413582 SPOPLQ6IQ16 392 aa10□□□□□ -0.81
RFFL-203ENST00000413582 CNNM4Q6P4Q7 775 aa10□□□□□ -0.81
RFFL-203ENST00000413582 ADAT2Q7Z6V5 191 aaKnown RBP10□□□□□ -0.81
RFFL-203ENST00000413582 DENND1CQ8IV53 801 aa10□□□□□ -0.81
RFFL-203ENST00000413582 CYB5D2Q8WUJ1 264 aa10□□□□□ -0.81
RFFL-203ENST00000413582 BAP1Q92560 729 aa10□□□□□ -0.81
RFFL-203ENST00000413582 CNDP2Q96KP4 475 aaKnown RBP10□□□□□ -0.81
RFFL-203ENST00000413582 SLC6A18Q96N87 628 aa10□□□□□ -0.81
RFFL-203ENST00000413582 CDK5RAP1Q96SZ6 601 aaKnown RBP10□□□□□ -0.81
RFFL-203ENST00000413582 ELF4Q99607 663 aaPredicted RBP10□□□□□ -0.81
RFFL-203ENST00000413582 ACE2Q9BYF1 805 aaPredicted RBP10□□□□□ -0.81
RFFL-203ENST00000413582 NRSN2Q9GZP1 204 aa10□□□□□ -0.81
RFFL-203ENST00000413582 FBRSQ9HAH7 460 aa10□□□□□ -0.81
RFFL-203ENST00000413582 USP3Q9Y6I4 520 aa10□□□□□ -0.81
RFFL-203ENST00000413582 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 J3QKU1 62 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 CAPN9O14815 690 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 LDOC1O95751 146 aaPredicted RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 ASS1P00966 412 aaKnown RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 DNTTP04053 509 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 WNT1P04628 370 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 C1SP09871 688 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 CDK4P11802 303 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 C21orf59P57076 290 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 RACK1P63244 317 aaKnown RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 DLG4P78352 724 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 CFHR1Q03591 330 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 TLE3Q04726 772 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 SLC39A14Q15043 492 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 FOXD4L6Q3SYB3 417 aaPredicted RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 TTC31Q49AM3 519 aaPredicted RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 KIAA0895LQ68EN5 471 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 FBXL19Q6PCT2 694 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 FOXD4L3Q6VB84 417 aaPredicted RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 UNC13DQ70J99 1090 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 GPR155Q7Z3F1 870 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 ZC3H3Q8IXZ2 948 aaKnown RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 LINC00301Q8NCQ3 95 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 SAP25Q8TEE9 199 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 WFIKKN2Q8TEU8 576 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 DDI1Q8WTU0 396 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 TSC1Q92574 1164 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 CYFIP2Q96F07 1278 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 LRRC27Q9C0I9 530 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 CUEDC2Q9H467 287 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 SGK2Q9HBY8 427 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 PRSS16Q9NQE7 514 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 MARCH2Q9P0N8 246 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 CGNQ9P2M7 1197 aaKnown RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
RFFL-203ENST00000413582 AK5Q9Y6K8 562 aa9.99□□□□□ -0.81
RFFL-203ENST00000413582 A0A1W2PPC4 97 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 SLC12A8A0AV02 714 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 C10orf142B7Z368 130 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 BRINP1O60477 761 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 YEATS4O95619 227 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 RPN1P04843 607 aaKnown RBP9.98□□□□□ -0.81
RFFL-203ENST00000413582 EPHA8P29322 1005 aaPredicted RBP9.98□□□□□ -0.81
RFFL-203ENST00000413582 DNM1Q05193 864 aaKnown RBP9.98□□□□□ -0.81
RFFL-203ENST00000413582 PDE4CQ08493 712 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 KNOP1Q1ED39 458 aaKnown RBP9.98□□□□□ -0.81
RFFL-203ENST00000413582 SGSM1Q2NKQ1 1148 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 MPPE1Q53F39 396 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 PRAMEF14Q5SWL7 426 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 ZNF776Q68DI1 518 aaPredicted RBP9.98□□□□□ -0.81
RFFL-203ENST00000413582 CHST9Q7L1S5 443 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 KIAA0907Q7Z7F0 614 aaPredicted RBP9.98□□□□□ -0.81
RFFL-203ENST00000413582 ADIPOR2Q86V24 386 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 ERICH1Q86X53 443 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 SPACA3Q8IXA5 215 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.98□□□□□ -0.81
RFFL-203ENST00000413582 TAF4BQ92750 862 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 FGF11Q92914 225 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 PLD4Q96BZ4 506 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 DHX58Q96C10 678 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 ARID3AQ99856 593 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 C7orf25Q9BPX7 421 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 DUSP16Q9BY84 665 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 EBF2Q9HAK2 575 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 ABCB8Q9NUT2 735 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 SERGEFQ9UGK8 458 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 GGA2Q9UJY4 613 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 RCOR1Q9UKL0 485 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 STRIP2Q9ULQ0 834 aa9.98□□□□□ -0.81
RFFL-203ENST00000413582 A0A1W2PR77 199 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 ERVH48-1M5A8F1 160 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 YKT6O15498 198 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms