RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ANKS1BQ7Z6G8 1248 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 NOP9Q86U38 636 aaKnown RBP10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 CACUL1Q86Y37 369 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 LGI2Q8N0V4 545 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 AOPEPQ8N6M6 819 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 ZNF366Q8N895 744 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 UCMAQ8WVF2 138 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 PIGKQ92643 395 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC39A13Q96H72 371 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 LOXL4Q96JB6 756 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 NOX5Q96PH1 765 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 GABRG3Q99928 467 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 STK33Q9BYT3 514 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC2A11Q9BYW1 496 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 FAM204AQ9H8W3 233 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 DDIT4Q9NX09 232 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 CALCOCO1Q9P1Z2 691 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 THAP10Q9P2Z0 257 aaPredicted RBP10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 GGA2Q9UJY4 613 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 CDV3Q9UKY7 258 aaKnown RBP10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 CEP83Q9Y592 693 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 MYH10P35580 1976 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 PRR5-ARHGAP8B1AHC4 643 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 PATE3B3GLJ2 98 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 EPHB6O15197 1021 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 IRAK2O43187 625 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 SYNCRIPO60506 623 aaKnown RBP10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 LATS1O95835 1130 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 APOEP02649 317 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 EPHX1P07099 455 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 ZNF806P0C7X5 589 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 TACR2P21452 398 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 KCNA4P22459 653 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 PRKCHP24723 683 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 PTGER3P43115 390 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 ARHGAP8P85298 464 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC6A3Q01959 620 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 MYL5Q02045 173 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 RING1Q06587 406 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 PUM1Q14671 1186 aaKnown RBP eCLIP10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 SYCP1Q15431 976 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 MEA1Q16626 185 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 FUT11Q495W5 492 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 FNDC3BQ53EP0 1204 aaKnown RBP10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 MS4A13Q5J8X5 152 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 EFHC1Q5JVL4 640 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 PMS2CLQ68D20 193 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 MBLAC2Q68D91 279 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 CAVIN1Q6NZI2 390 aaKnown RBP10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 OLFML1Q6UWY5 402 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 MMS22LQ6ZRQ5 1243 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 LPCAT2Q7L5N7 544 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 DGLUCYQ7Z3D6 616 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 ADIPOR2Q86V24 386 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 CIR1Q86X95 450 aaPredicted RBP10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 MFN1Q8IWA4 741 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 TMEM35BQ8NCS4 154 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC20A1Q8WUM9 679 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 CPA5Q8WXQ8 436 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 SPACA7Q96KW9 195 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 MRGPRX1Q96LB2 322 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 PRICKLE1Q96MT3 831 aaPredicted RBP10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 DDX50Q9BQ39 737 aaKnown RBP10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 GANQ9H2C0 597 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 CD248Q9HCU0 757 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC12A6Q9UHW9 1150 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 PLA2G4CQ9UP65 541 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 HELZP42694 1942 aaKnown RBP10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 MYOFQ9NZM1 2061 aa10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 ATXN2Q99700 1313 aaKnown RBP10.56□□□□□ -0.72
NCKIPSD-202ENST00000413374 CFAP54Q96N23 3096 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 BCLAF3A2AJT9 711 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 F8VZ95 297 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 H0Y626 953 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 GOLGA8SH3BPF8 625 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 TIMM44O43615 452 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 LRP3O75074 770 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 PABPC1P11940 636 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 ATP1A3P13637 1013 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 POLR2EP19388 210 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 TFE3P19532 575 aaPredicted RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 GGCXP38435 758 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 RPL6Q02878 288 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 UBXN1Q04323 297 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 LMAN2Q12907 356 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 BYSLQ13895 437 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 STARD3Q14849 445 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 NCAPHQ15003 741 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 ANO6Q4KMQ2 910 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 FSCBQ5H9T9 825 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 PLA2G2CQ5R387 149 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 NAA35Q5VZE5 725 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 SERPINA13PQ6UXR4 307 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 BEND5Q7L4P6 421 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 CYP2U1Q7Z449 544 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 CHSY1Q86X52 802 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 ERICH1Q86X53 443 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 TMPRSS6Q8IU80 811 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 CCDC117Q8IWD4 279 aaPredicted RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 ATP6V0D2Q8N8Y2 350 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms