RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 MIER3Q7Z3K6 550 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 UNC5CLQ8IV45 518 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 GLB1L2Q8IW92 636 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 SMYD4Q8IYR2 804 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 DNAJC5GQ8N7S2 189 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 AGR3Q8TD06 166 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 CCHCR1Q8TD31 782 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 HOXB13Q92826 284 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 RAB7BQ96AH8 199 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 FAM84AQ96KN4 292 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 CNOT6LQ96LI5 555 aaKnown RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 CFAP57Q96MR6 1250 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 MED15Q96RN5 788 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 TRIM7Q9C029 511 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 MTMR12Q9C0I1 747 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 STMN4Q9H169 189 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 MTG2Q9H4K7 406 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC32A1Q9H598 525 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 VCPKMTQ9H867 229 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 TTC12Q9H892 705 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 MMRN2Q9H8L6 949 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 SEMA4BQ9NPR2 832 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 GLRX2Q9NS18 164 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 HOMER3Q9NSC5 361 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 INTS13Q9NVM9 706 aa6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 BEX4Q9NWD9 120 aaPredicted RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 PTRH2Q9Y3E5 179 aaKnown RBP6.12□□□□□ -1.43
CBX1P3-201ENST00000413296 DISP1Q96F81 1524 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 A0A087WWL8 130 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 PRAMEF22A3QJZ6 481 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 LRRC72A6NJI9 287 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SEPT4O43236 478 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 NRP2O60462 931 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 OPHN1O60890 802 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 FYNP06241 537 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ERCC2P18074 760 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 PRKCHP24723 683 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 GPD2P43304 727 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC15A1P46059 708 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 RGS3P49796 1198 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 STAT5BP51692 787 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 NRG3P56975 720 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ERVFC1P60507 584 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 STX1BP61266 288 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 TRA2BP62995 288 aaKnown RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 PTSQ03393 145 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC20A2Q08357 652 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ELP6Q0PNE2 266 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 TMEM115Q12893 351 aaPredicted RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 FOXC1Q12948 553 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 TUBB3Q13509 450 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ALCAMQ13740 583 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SNTB1Q13884 538 aaKnown RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 GRM4Q14833 912 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 INSCQ1MX18 579 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 CCDC122Q5T0U0 273 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ZNF468Q5VIY5 522 aaPredicted RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 PRAMEF18Q5VWM3 479 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SHEQ5VZ18 495 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 DGAT2L7PQ6IED9 249 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SARM1Q6SZW1 724 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 MTHFD1LQ6UB35 978 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 CDH26Q8IXH8 852 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SFRP1Q8N474 314 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 PDCL2Q8N4E4 241 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC15A4Q8N697 577 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ANKS4BQ8N8V4 417 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 IL17RCQ8NAC3 791 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 NEK11Q8NG66 645 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 URGCPQ8TCY9 931 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 WDR60Q8WVS4 1066 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 CORO2AQ92828 525 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 DDX17Q92841 729 aaKnown RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SAT2Q96F10 170 aaPredicted RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 MAP6Q96JE9 813 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 GAL3ST4Q96RP7 486 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 FIZ1Q96SL8 496 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 FOXB1Q99853 325 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 NACAP1Q9BZK3 213 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 TTYH1Q9H313 450 aaPredicted RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 STN1Q9H668 368 aaKnown RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 YY1AP1Q9H869 796 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 SCPEP1Q9HB40 452 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 MAGEE1Q9HCI5 957 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ZBTB26Q9HCK0 441 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 CYP39A1Q9NYL5 469 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 MARCH2Q9P0N8 246 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ZC3H7BQ9UGR2 993 aaKnown RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 FBXO40Q9UH90 709 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ANAPC2Q9UJX6 822 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 INTS6Q9UL03 887 aaKnown RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ZDHHC8Q9ULC8 765 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 CAPN11Q9UMQ6 739 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 WASF3Q9UPY6 502 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 KCNK7Q9Y2U2 307 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 CHTOPQ9Y3Y2 248 aaKnown RBP6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ASB3Q9Y575 518 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 X6R8D5 127 aa6.11□□□□□ -1.43
CBX1P3-201ENST00000413296 ARAP3Q8WWN8 1544 aa6.1□□□□□ -1.43
CBX1P3-201ENST00000413296 RAPGEF2Q9Y4G8 1499 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms