RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 ISXQ2M1V0 245 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ARL13BQ3SXY8 428 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 MPPE1Q53F39 396 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 C4orf17Q53FE4 359 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 C3orf38Q5JPI3 329 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CDCP2Q5VXM1 449 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF776Q68DI1 518 aaPredicted RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 MCTP1Q6DN14 999 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 NCEH1Q6PIU2 408 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 IGF2-ASQ6U949 168 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PAQR9Q6ZVX9 377 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 USP53Q70EK8 1073 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CHST9Q7L1S5 443 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 DYMQ7RTS9 669 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 TRAPPC11Q7Z392 1133 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRPF39Q86UA1 669 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 IQCHQ86VS3 1027 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CBWD2Q8IUF1 395 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 WDR49Q8IV35 697 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 DENND1CQ8IV53 801 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 AHI1Q8N157 1196 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 GPD1LQ8N335 351 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CPXM2Q8N436 756 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ARL14Q8N4G2 192 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 EXD3Q8N9H8 876 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 MFSD2AQ8NA29 543 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 RBBP8NLQ8NC74 664 aaPredicted RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZSWIM2Q8NEG5 633 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZMIZ2Q8NF64 920 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 OR4C6Q8NH72 309 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 WFIKKN2Q8TEU8 576 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 DDI1Q8WTU0 396 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 LARP4BQ92615 738 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 HPS3Q969F9 1004 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SYAP1Q96A49 352 aaPredicted RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SERAC1Q96JX3 654 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC46A1Q96NT5 459 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CCNL2Q96S94 520 aaPredicted RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CDK5RAP1Q96SZ6 601 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 OMDQ99983 421 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SEMA3CQ99985 751 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ORAI3Q9BRQ5 295 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CBWD1Q9BRT8 395 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 STRA6Q9BX79 667 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 GZF1Q9H116 711 aaPredicted RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 OSBPL2Q9H1P3 480 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 RSPH9Q9H1X1 276 aaPredicted RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 NEUROG2Q9H2A3 272 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 IKZF4Q9H2S9 585 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PABPC3Q9H361 631 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PCIF1Q9H4Z3 704 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 NMUR1Q9HB89 426 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CSNK1G1Q9HCP0 422 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ASCL3Q9NQ33 180 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRSS16Q9NQE7 514 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 OLFML3Q9NRN5 406 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 KRT82Q9NSB4 513 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 STARD5Q9NSY2 213 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 BLOC1S4Q9NUP1 217 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 OSER1Q9NX31 292 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CLIC5Q9NZA1 410 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 RASAL2Q9UJF2 1139 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 NAGPAQ9UK23 515 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 NUDT5Q9UKK9 219 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 STRIP2Q9ULQ0 834 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CLEC4EQ9ULY5 219 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SCML2Q9UQR0 700 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 DMTF1Q9Y222 760 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SSUH2Q9Y2M2 353 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 KIF3AQ9Y496 699 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 NME7Q9Y5B8 376 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PCDHB1Q9Y5F3 818 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PCDHGA8Q9Y5G5 932 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 PCDHA5Q9Y5H7 936 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 ATMQ13315 3056 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 HELZP42694 1942 aaKnown RBP2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 SPG11Q96JI7 2443 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 FLNCQ14315 2725 aa2.48□□□□□ -2.01
RNU4-53P-201ENST00000410828 CACNA1DQ01668 2161 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 ITPR3Q14573 2671 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TNRC6BQ9UPQ9 1833 aaKnown RBP2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBC1D3DA0A087WVF3 549 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBC1D3IA0A087WXS9 549 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBC1D3EA0A087X179 549 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBC1D3KA0A087X1G2 549 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 A0A1B0GVM2 712 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 A0A1W2PP55 124 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC12A8A0AV02 714 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TARSL2A2RTX5 802 aaKnown RBP2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBC1D3FA6NER0 549 aaPredicted RBP2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 NEMP2A6NFY4 417 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 CDRT15L2A8MXV6 281 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBC1D3LB9A6J9 549 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRAMEF26H0Y7S4 382 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 TRIM38O00635 465 aa2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 RIOK3O14730 519 aaKnown RBP2.47□□□□□ -2.01
RNU4-53P-201ENST00000410828 WNT9AO14904 365 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms