RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 CCDC15Q0P6D6 951 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 RIGQ13278 110 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 UGP2Q16851 508 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 C3orf36Q3SXR2 165 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 LIPMQ5VYY2 423 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 ZNF774Q6NX45 483 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 C19orf48Q6RUI8 117 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 GPSM1Q86YR5 675 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 BPIFB1Q8TDL5 484 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 SORCS1Q8WY21 1168 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 PPP2R3CQ969Q6 453 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 TUBA1CQ9BQE3 449 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 SENP7Q9BQF6 1050 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 CINPQ9BW66 212 aaPredicted RBP0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 ZNF518BQ9C0D4 1074 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 PDZD7Q9H5P4 517 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 GAREM1Q9H706 876 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 IFT22Q9H7X7 185 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 TXNRD2Q9NNW7 524 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 ZNF277Q9NRM2 450 aaPredicted RBP0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 C14orf119Q9NWQ9 140 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 XPR1Q9UBH6 696 aa0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 FEZ2Q9UHY8 353 aaPredicted RBP0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 APOBEC2Q9Y235 224 aaKnown RBP0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 CFAP20Q9Y6A4 193 aaKnown RBP0.87□□□□□ -2.27
RNU6-554P-201ENST00000410466 MS4A18H0YCH9 400 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 I6L893 689 aaPredicted RBP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 EYA2O00167 538 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 ZEB2O60315 1214 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 ATP1A1P05023 1023 aaKnown RBP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 XRCC6P12956 609 aaKnown RBP eCLIP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 GATA1P15976 413 aaPredicted RBP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 KCNA5P22460 613 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 AMTP48728 403 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 PMS2P54278 862 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 TIRAPP58753 221 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 SELENOVP59797 346 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 HNRNPKP61978 463 aaKnown RBP eCLIP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 TRA2BP62995 288 aaKnown RBP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 IRX1P78414 480 aaPredicted RBP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 EXOSC9Q06265 439 aaKnown RBP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 LRMPQ12912 555 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 PEX6Q13608 980 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 EEF1AKMT2Q5JPI9 291 aaKnown RBP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 TTC39AQ5SRH9 613 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 UNQ6126/PRO20091Q6UXV3 157 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 FOXL2NBQ6ZUU3 175 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 ADIPOR2Q86V24 386 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 LEO1Q8WVC0 666 aaPredicted RBP0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 MAML1Q92585 1016 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 VPS50Q96JG6 964 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 LINC00167Q96N53 147 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 F2RL3Q96RI0 385 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 MESP1Q9BRJ9 268 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 SPAG4Q9NPE6 437 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 ASNSD1Q9NWL6 643 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 IPPQ9Y573 584 aa0.86□□□□□ -2.27
RNU6-554P-201ENST00000410466 FER1L4A9Z1Z3 1794 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 CCDC154A6NI56 674 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 A8MVJ9 347 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 MYO1CO00159 1063 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 EXOC5O00471 708 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 PHGDHO43175 533 aaKnown RBP0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 HTRA2O43464 458 aaPredicted RBP0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 AHSGP02765 367 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 WNT1P04628 370 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 GALNSP34059 522 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 ID4P47928 161 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 CLK1P49759 484 aaKnown RBP0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 WNT3P56703 355 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 NSUN2Q08J23 767 aaKnown RBP eCLIP0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 SREBF2Q12772 1141 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 C21orf62-AS1Q17RA5 79 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 ZNF876PQ49A33 203 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 Q6ZSV7 163 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 TUBA1AQ71U36 451 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 ADGRA1Q86SQ6 560 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 ZNF440Q8IYI8 595 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 C3orf20Q8ND61 904 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 ZFPM2Q8WW38 1151 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 CELF1Q92879 486 aaKnown RBP0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 MKL1Q969V6 931 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 LGALS12Q96DT0 336 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 TTC1Q99614 292 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 MAGEH1Q9H213 219 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 UBTD1Q9HAC8 227 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 ERVK-5Q9HDB9 667 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 ZFP57Q9NU63 452 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 SLC8A2Q9UPR5 921 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 POLHQ9Y253 713 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 TMX2Q9Y320 296 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 EMSYQ7Z589 1322 aa0.85□□□□□ -2.27
RNU6-554P-201ENST00000410466 IGLV5-37A0A075B6J1 123 aa0.84□□□□□ -2.27
RNU6-554P-201ENST00000410466 IGLV5-52A0A0A0MRZ9 124 aa0.84□□□□□ -2.27
RNU6-554P-201ENST00000410466 NDUFAF8A1L188 74 aa0.84□□□□□ -2.27
RNU6-554P-201ENST00000410466 LRRC14BA6NHZ5 514 aa0.84□□□□□ -2.27
RNU6-554P-201ENST00000410466 NDUFS2O75306 463 aa0.84□□□□□ -2.27
RNU6-554P-201ENST00000410466 SERPINI2O75830 405 aa0.84□□□□□ -2.27
RNU6-554P-201ENST00000410466 SLC3A2P08195 630 aaKnown RBP0.84□□□□□ -2.27
RNU6-554P-201ENST00000410466 AKR1A1P14550 325 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms