RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 BCAT1P54687 386 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 IGBP1P78318 339 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 N4BP2L1Q5TBK1 243 aaPredicted RBP17.18■□□□□ 0.34
LIMS2-208ENST00000410011 ZNF410Q86VK4 478 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 OR6Y1Q8NGX8 325 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 UCMAQ8WVF2 138 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 ISL2Q96A47 359 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 ZNF778Q96MU6 729 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 FERMT1Q9BQL6 677 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 XPNPEP3Q9NQH7 507 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 WASF2Q9Y6W5 498 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 CCNT2O60583 730 aaKnown RBP17.17■□□□□ 0.34
LIMS2-208ENST00000410011 STK10O94804 968 aaKnown RBP17.17■□□□□ 0.34
LIMS2-208ENST00000410011 BTKQ06187 659 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 FRG1Q14331 258 aaKnown RBP17.17■□□□□ 0.34
LIMS2-208ENST00000410011 Q3C1V9 767 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 MTHFD1LQ6UB35 978 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 EMID1Q96A84 441 aaPredicted RBP17.17■□□□□ 0.34
LIMS2-208ENST00000410011 TRAPPC9Q96Q05 1148 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 YIPF3Q9GZM5 350 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 TXNRD2Q9NNW7 524 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 PDGFCQ9NRA1 345 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 SPATS2LQ9NUQ6 558 aaKnown RBP17.17■□□□□ 0.34
LIMS2-208ENST00000410011 PDP2Q9P2J9 529 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 DNAJC16Q9Y2G8 782 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 CITO14578 2027 aa17.17■□□□□ 0.34
LIMS2-208ENST00000410011 VTNP04004 478 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 VAV1P15498 845 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 ARL4AP40617 200 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 HARS2P49590 506 aaKnown RBP17.16■□□□□ 0.34
LIMS2-208ENST00000410011 CDK7P50613 346 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 HIC1Q14526 733 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 PCLAFQ15004 111 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 FAM182AQ5T1J6 154 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 C1orf146Q5VVC0 180 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 ZCCHC23Q6ZST2 131 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 KBTBD2Q8IY47 623 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 COLGALT1Q8NBJ5 622 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 SLC24A3Q9HC58 644 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 FAM49BQ9NUQ9 324 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 NDE1Q9NXR1 346 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.16■□□□□ 0.34
LIMS2-208ENST00000410011 KAT6AQ92794 2004 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 SPDYE5A6NIY4 337 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 TPP1O14773 563 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 ITM2AO43736 263 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 PROCP04070 461 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 ITGA2BP08514 1039 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 CALRP27797 417 aaKnown RBP17.16■□□□□ 0.34
LIMS2-208ENST00000410011 MAGEA12P43365 314 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 UBAP2LQ14157 1087 aaKnown RBP17.16■□□□□ 0.34
LIMS2-208ENST00000410011 SOWAHAQ2M3V2 549 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 EFHC1Q5JVL4 640 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 PGM2L1Q6PCE3 622 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 DENND5BQ6ZUT9 1274 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 PPTC7Q8NI37 304 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 PPP4R1Q8TF05 950 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 LRRN4Q8WUT4 740 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 NLRP7Q8WX94 980 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 FZD10Q9ULW2 581 aa17.16■□□□□ 0.34
LIMS2-208ENST00000410011 PRKCGP05129 697 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 ADORA2AP29274 412 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 DSG1Q02413 1049 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 HNRNPDQ14103 355 aaKnown RBP17.15■□□□□ 0.34
LIMS2-208ENST00000410011 CCDC153Q494R4 210 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 GRTP1Q5TC63 336 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 ERO1BQ86YB8 467 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 GPC2Q8N158 579 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 CCDC185Q8N715 623 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 BEST2Q8NFU1 509 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 SORT1Q99523 831 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 ZDHHC7Q9NXF8 308 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 IGSF9Q9P2J2 1179 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 COPG2Q9UBF2 871 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 ZNF195O14628 629 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 SIN3BO75182 1162 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 C6orf222P0C671 652 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-208ENST00000410011 CCDC130P13994 396 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 PRDX6P30041 224 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 MATKP42679 507 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 ATXN1P54253 815 aaKnown RBP17.15■□□□□ 0.34
LIMS2-208ENST00000410011 RPL10AP62906 217 aaKnown RBP17.15■□□□□ 0.34
LIMS2-208ENST00000410011 SHCBP1Q8NEM2 672 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 ACTRT2Q8TDY3 377 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 JADE3Q92613 823 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 CLPTM1LQ96KA5 538 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 SNX27Q96L92 541 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 TSC22D3Q99576 134 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 CPNE1Q99829 537 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 APOL6Q9BWW8 343 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 DNAI2Q9GZS0 605 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 FAM192AQ9GZU8 254 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
LIMS2-208ENST00000410011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.14■□□□□ 0.33
LIMS2-208ENST00000410011 UNCXA6NJT0 531 aa17.14■□□□□ 0.33
LIMS2-208ENST00000410011 EIF4E1BA6NMX2 242 aaKnown RBP17.14■□□□□ 0.33
LIMS2-208ENST00000410011 TOP3BO95985 862 aaKnown RBP17.14■□□□□ 0.33
LIMS2-208ENST00000410011 GOT1P17174 413 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms