RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 SPOCD1Q6ZMY3 1216 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 C14orf80Q86SX3 495 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 ARID3BQ8IVW6 561 aaPredicted RBP13.03□□□□□ -0.32
PMS1-204ENST00000409823 RCOR2Q8IZ40 523 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 ZSCAN18Q8TBC5 510 aaPredicted RBP13.03□□□□□ -0.32
PMS1-204ENST00000409823 MYEOVQ96EZ4 313 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 S1PR5Q9H228 398 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 TASP1Q9H6P5 420 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 DDX56Q9NY93 547 aaKnown RBP13.03□□□□□ -0.32
PMS1-204ENST00000409823 MFHAS1Q9Y4C4 1052 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 MRFAP1Q9Y605 127 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 ZNF197O14709 1029 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 IGLV3-27P01718 113 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 FOSL2P15408 326 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 VIPR2P41587 438 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 DPYSL2Q16555 572 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 LONRF2Q1L5Z9 754 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 BRMS1LQ5PSV4 323 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 ATAT1Q5SQI0 421 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 NPAS3Q8IXF0 933 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 LRRN4Q8WUT4 740 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 TEKT4Q8WW24 435 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 USP13Q92995 863 aaPredicted RBP13.03□□□□□ -0.32
PMS1-204ENST00000409823 PABPC5Q96DU9 382 aaKnown RBP13.03□□□□□ -0.32
PMS1-204ENST00000409823 OSBPL8Q9BZF1 889 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 CDC23Q9UJX2 597 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 LRIG2O94898 1065 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 HOXB8P17481 243 aaPredicted RBP13.02□□□□□ -0.32
PMS1-204ENST00000409823 POU3F3P20264 500 aaPredicted RBP13.02□□□□□ -0.32
PMS1-204ENST00000409823 IRAK1P51617 712 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 ARSEP51690 589 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 TFDP3Q5H9I0 405 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 MS4A13Q5J8X5 152 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 NADSYN1Q6IA69 706 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 CIR1Q86X95 450 aaPredicted RBP13.02□□□□□ -0.32
PMS1-204ENST00000409823 ZDHHC14Q8IZN3 488 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 CFAP52Q8N1V2 620 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 ZNF276Q8N554 614 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 LEMD2Q8NC56 503 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 LRRN4CLQ8ND94 238 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 NTAN1Q96AB6 310 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 NCAPGQ9BPX3 1015 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 TDP1Q9NUW8 608 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 ETNK2Q9NVF9 386 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 MPP6Q9NZW5 540 aa13.02□□□□□ -0.32
PMS1-204ENST00000409823 AGO1Q9UL18 857 aaKnown RBP13.02□□□□□ -0.32
PMS1-204ENST00000409823 HBS1LQ9Y450 684 aaKnown RBP13.02□□□□□ -0.32
PMS1-204ENST00000409823 LEFTY2O00292 366 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 TSPAN3O60637 253 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 FGF19O95750 216 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 SLC2A3P11169 496 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 PRLRP16471 622 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 AMPD1P23109 780 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 NUGGCQ68CJ6 796 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 RFX6Q8HWS3 928 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
PMS1-204ENST00000409823 PBKQ96KB5 322 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 BTN2A3PQ96KV6 586 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 CSPG4P5Q96PW8 444 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 CLUHO75153 1309 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 OBSL1O75147 1896 aa13.02□□□□□ -0.33
PMS1-204ENST00000409823 EEF2KO00418 725 aaKnown RBP13.01□□□□□ -0.33
PMS1-204ENST00000409823 DAPK3O43293 454 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 EPHB2P29323 1055 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 SLC6A4P31645 630 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 KPNA1P52294 538 aaPredicted RBP13.01□□□□□ -0.33
PMS1-204ENST00000409823 SLC7A9P82251 487 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 RING1Q06587 406 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 SCAPQ12770 1279 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 NNTQ13423 1086 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 AUHQ13825 339 aaKnown RBP13.01□□□□□ -0.33
PMS1-204ENST00000409823 ANKRD20A8PQ5CZ79 823 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 MAP7D3Q8IWC1 876 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 PCDH19Q8TAB3 1148 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 MSLNLQ96KJ4 702 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 MAK16Q9BXY0 300 aaKnown RBP13.01□□□□□ -0.33
PMS1-204ENST00000409823 POMKQ9H5K3 350 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 SLC12A6Q9UHW9 1150 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 hCG_1818297A0A087WSY0 165 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 CST8O60676 142 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 ARL4AP40617 200 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 TPI1P60174 286 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 MRPS25P82663 173 aaKnown RBP13.01□□□□□ -0.33
PMS1-204ENST00000409823 ITIH3Q06033 890 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 FAM78AQ5JUQ0 283 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 NPNTQ6UXI9 565 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 TFAP2DQ7Z6R9 452 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 CHSY1Q86X52 802 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 SLC13A5Q86YT5 568 aaPredicted RBP13.01□□□□□ -0.33
PMS1-204ENST00000409823 UNC45BQ8IWX7 931 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 BBS7Q8IWZ6 715 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 ATP6V0D2Q8N8Y2 350 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 ATG4AQ8WYN0 398 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 LRRC3BQ96PB8 259 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 CARD6Q9BX69 1037 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 SH3BP1Q9Y3L3 701 aa13.01□□□□□ -0.33
PMS1-204ENST00000409823 E9PAM4 449 aa13□□□□□ -0.33
PMS1-204ENST00000409823 PGRMC1O00264 195 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms