RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 FAM126AQ9BYI3 521 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 WDCPQ9H6R7 721 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 ZNHIT6Q9NWK9 470 aaKnown RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 PLK2Q9NYY3 685 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 TMEM59LQ9UK28 342 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 DOCK4Q8N1I0 1966 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 TMCO5BA8MYB1 307 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 H0Y858 1186 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 K7EQS6 105 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 TSPAN3O60637 253 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 TBL1XO60907 577 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 RTN2O75298 545 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 MYBL1P10243 752 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 SKILP12757 684 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 PDGFRAP16234 1089 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 GPD1P21695 349 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 HOXD9P28356 352 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-205ENST00000409810 SLC6A4P31645 630 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 NRLP54845 237 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 SEC13P55735 322 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 GAS6Q14393 721 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 FAM133BQ5BKY9 247 aaKnown RBP11.3□□□□□ -0.6
CHMP3-205ENST00000409810 MS4A13Q5J8X5 152 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 RABGAP1LQ5R372 815 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 PIK3R6Q5UE93 754 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 RAP1GAP2Q684P5 730 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 NADSYN1Q6IA69 706 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 RFWD3Q6PCD5 774 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 DCUN1D2Q6PH85 259 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 PHTF2Q8N3S3 785 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 WFIKKN2Q8TEU8 576 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 USP33Q8TEY7 942 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 ATOH1Q92858 354 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-205ENST00000409810 NT5C3BQ969T7 300 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 CFAP57Q96MR6 1250 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 TBCBQ99426 244 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 PARVAQ9NVD7 372 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 ARHGEF38Q9NXL2 777 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 FBXO10Q9UK96 956 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 SLC8A2Q9UPR5 921 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 SLC27A6Q9Y2P4 619 aa11.3□□□□□ -0.6
CHMP3-205ENST00000409810 C2CD4BA6NLJ0 364 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 SIGLEC16A6NMB1 481 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 GFRA2O00451 464 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 DDX3XO00571 662 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHMP3-205ENST00000409810 NPC1O15118 1278 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 CISD3P0C7P0 127 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 SP9P0CG40 484 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 TACR2P21452 398 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 TIE1P35590 1138 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 PTPN9P43378 593 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 CXCR3P49682 368 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 ATP11AP98196 1134 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 SATB1Q01826 763 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 CSTF1Q05048 431 aaKnown RBP11.29□□□□□ -0.6
CHMP3-205ENST00000409810 CDH18Q13634 790 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 EIF4HQ15056 248 aaKnown RBP11.29□□□□□ -0.6
CHMP3-205ENST00000409810 ARL13BQ3SXY8 428 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 C2orf27AQ580R0 203 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 EOGTQ5NDL2 527 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 OTUD1Q5VV17 481 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-205ENST00000409810 HGSNATQ68CP4 663 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 SDE2Q6IQ49 451 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 SYT13Q7L8C5 426 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 STRADAQ7RTN6 431 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 PHLDB2Q86SQ0 1253 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 CNGA4Q8IV77 575 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 MFN1Q8IWA4 741 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 LGI2Q8N0V4 545 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 AHI1Q8N157 1196 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 EMC1Q8N766 993 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 ZNF513Q8N8E2 541 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-205ENST00000409810 OR8K1Q8NGG5 319 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 RXFP2Q8WXD0 754 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 EZH1Q92800 747 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-205ENST00000409810 MCEEQ96PE7 176 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 TKTL2Q9H0I9 626 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 RBSNQ9H1K0 784 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 DEF6Q9H4E7 631 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 PIGVQ9NUD9 493 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 TAS2R14Q9NYV8 317 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 RAPGEFL1Q9UHV5 662 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 STARD13Q9Y3M8 1113 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 SCINQ9Y6U3 715 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 SPAG17Q6Q759 2223 aa11.29□□□□□ -0.6
CHMP3-205ENST00000409810 GOLGA6L7A0A1B0GV03 622 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 TIMM44O43615 452 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 PAGE1O75459 146 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 LUC7L3O95232 432 aaKnown RBP11.28□□□□□ -0.6
CHMP3-205ENST00000409810 MOCS3O95396 460 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 FTLP02792 175 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-205ENST00000409810 RRM1P23921 792 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 HNRNPH3P31942 346 aaKnown RBP11.28□□□□□ -0.6
CHMP3-205ENST00000409810 KIR2DL1P43626 348 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-205ENST00000409810 OXCT1P55809 520 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 NHLH1Q02575 133 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 CDO1Q16878 200 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 TRNP1Q6NT89 227 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms