RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SELENOOQ9BVL4 669 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 VN1R3Q9BXE9 311 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 EIF2AQ9BY44 585 aaKnown RBP5.08□□□□□ -1.6
CLK1-203ENST00000409769 TUBA8Q9NY65 449 aaPredicted RBP5.08□□□□□ -1.6
CLK1-203ENST00000409769 VPS51Q9UID3 782 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 ITGB1BP2Q9UKP3 347 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 TOGARAM1Q9Y4F4 1720 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 MRC1P22897 1456 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 ATRNO75882 1429 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 MAP3K5Q99683 1374 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 ITGB4P16144 1822 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 IL16Q14005 1332 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 PRRT4C9JH25 899 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 RAB27BO00194 218 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 PPEF2O14830 753 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 HTATSF1O43719 755 aaKnown RBP5.07□□□□□ -1.6
CLK1-203ENST00000409769 PIAS2O75928 621 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 RASAL1O95294 804 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 NBPF7P0C2Y1 421 aaPredicted RBP5.07□□□□□ -1.6
CLK1-203ENST00000409769 ZNF853P0CG23 659 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 CYP2D6P10635 497 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 FGFR2P21802 821 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 MPGP29372 298 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 MMP13P45452 471 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 AK2P54819 239 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 HOXA4Q00056 320 aaPredicted RBP5.07□□□□□ -1.6
CLK1-203ENST00000409769 CYP1B1Q16678 543 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 LY6KQ17RY6 165 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 PLEKHO1Q53GL0 409 aaPredicted RBP5.07□□□□□ -1.6
CLK1-203ENST00000409769 CACHD1Q5VU97 1274 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 BEND5Q7L4P6 421 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 WDR63Q8IWG1 891 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 TMEM171Q8WVE6 324 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 R3HDM4Q96D70 268 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 GDF15Q99988 308 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 PRSS22Q9GZN4 317 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 ADAMTS5Q9UNA0 930 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 USP22Q9UPT9 525 aa5.07□□□□□ -1.6
CLK1-203ENST00000409769 DRG1Q9Y295 367 aaKnown RBP5.07□□□□□ -1.6
CLK1-203ENST00000409769 KDM6AO15550 1401 aaPredicted RBP5.06□□□□□ -1.6
CLK1-203ENST00000409769 TNS2Q63HR2 1409 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 CACNA1FO60840 1977 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 PAPPAQ13219 1627 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 POM121BA6NF01 834 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 RASA4BC9J798 803 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 ADAMTS3O15072 1205 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 KPNA5O15131 536 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 RASA4O43374 803 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 RGS10O43665 173 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 NPSP0C0P6 89 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 MYCLP12524 364 aaPredicted RBP5.06□□□□□ -1.6
CLK1-203ENST00000409769 GKP32189 559 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 CYP2C18P33260 490 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 STT3AP46977 705 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 GATMP50440 423 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 COPAP53621 1224 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 PDE1AP54750 535 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 LMOD3Q0VAK6 560 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 PICALMQ13492 652 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 CLCA4Q14CN2 919 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 CEP78Q5JTW2 689 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 PCID2Q5JVF3 399 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 TMEM63BQ5T3F8 832 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 MANEALQ5VSG8 457 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 KRT73Q86Y46 540 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 GALNT16Q8N428 558 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 LRRC71Q8N4P6 559 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 IL17REQ8NFR9 667 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 ABHD11Q8NFV4 315 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 SVIPQ8NHG7 77 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 CTHRC1Q96CG8 243 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 HMCESQ96FZ2 354 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 TBCBQ99426 244 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 DNAJB11Q9UBS4 358 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 PHTF1Q9UMS5 762 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 UBR2Q8IWV8 1755 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 DOT1LQ8TEK3 1739 aa5.06□□□□□ -1.6
CLK1-203ENST00000409769 COL15A1P39059 1388 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 AFF2P51816 1311 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 PCDH11XQ9BZA7 1347 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 PCDH11YQ9BZA8 1340 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 BRWD3Q6RI45 1802 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 SBF2Q86WG5 1849 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 KAT6BQ8WYB5 2073 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 A0A087WZ62 844 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 CYP2D7A0A087X1C5 515 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 H7C1Q1 480 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 SMIM22K7EJ46 135 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 PSMD9O00233 223 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 TRIM38O00635 465 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 RNMTO43148 476 aaKnown RBP5.05□□□□□ -1.6
CLK1-203ENST00000409769 PMPCBO75439 489 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 FGF18O76093 207 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 TOP3BO95985 862 aaKnown RBP5.05□□□□□ -1.6
CLK1-203ENST00000409769 CENPBP07199 599 aaPredicted RBP5.05□□□□□ -1.6
CLK1-203ENST00000409769 MYL4P12829 197 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 PGDP52209 483 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 DCTN1Q14203 1278 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 TRIP6Q15654 476 aaKnown RBP5.05□□□□□ -1.6
CLK1-203ENST00000409769 PXDC1Q5TGL8 231 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms