RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ZFXP17010 805 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 ERCC2P18074 760 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 EPHB2P29323 1055 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 ECHS1P30084 290 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 PLTPP55058 493 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 SEMA3BQ13214 749 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 CUL1Q13616 776 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 PTK6Q13882 451 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 DPYSQ14117 519 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 UNC45BQ8IWX7 931 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 GPR65Q8IYL9 337 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 CCDC89Q8N998 374 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 FAM71DQ8N9W8 422 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 KREMEN2Q8NCW0 462 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 PDZD8Q8NEN9 1154 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 AENQ8WTP8 325 aaKnown RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 HNRNPLLQ8WVV9 542 aaKnown RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 CEP295NLQ96MC4 621 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 EPAS1Q99814 870 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 ZNF334Q9HCZ1 680 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 FAM114A2Q9NRY5 505 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 TRPM5Q9NZQ8 1165 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 RCOR3Q9P2K3 495 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 C2orf78A6NCI8 922 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 KCNU1A8MYU2 1149 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 COCHO43405 550 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 APOEP02649 317 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 ATP5C1P36542 298 aaKnown RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 CAMK1Q14012 370 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 PPP2R5DQ14738 602 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 HECTD3Q5T447 861 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 SYDE1Q6ZW31 735 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 SEC14L1Q92503 715 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 PSMG2Q969U7 264 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 MYRFLQ96LU7 910 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 HAPLN3Q96S86 360 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 FRMD8P1Q9BZ68 369 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 TRPC7Q9HCX4 862 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 DTLQ9NZJ0 730 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 DRG1Q9Y295 367 aaKnown RBP12.87□□□□□ -0.35
CHMP3-204ENST00000409727 NEU2Q9Y3R4 380 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 HS3ST4Q9Y661 456 aa12.87□□□□□ -0.35
CHMP3-204ENST00000409727 GBF1Q92538 1859 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 C5orf67F2Z3F1 127 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 PER2O15055 1255 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 CCL16O15467 120 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 KCNQ1P51787 676 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 GPS1Q13098 491 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 TRIP4Q15650 581 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-204ENST00000409727 LILRA6Q6PI73 481 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 RBM23Q86U06 439 aaKnown RBP12.86□□□□□ -0.35
CHMP3-204ENST00000409727 ITIH5Q86UX2 942 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 TP53INP2Q8IXH6 220 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 TTC16Q8NEE8 873 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 SLC22A17Q8WUG5 538 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 OVCA2Q8WZ82 227 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 TRMT2BQ96GJ1 504 aaKnown RBP12.86□□□□□ -0.35
CHMP3-204ENST00000409727 SLC39A13Q96H72 371 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
CHMP3-204ENST00000409727 GRHL1Q9NZI5 618 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 IRAK3Q9Y616 596 aa12.86□□□□□ -0.35
CHMP3-204ENST00000409727 DCLK1O15075 740 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 KCNN4O15554 427 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 SLC2A3P11169 496 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 RBL1P28749 1068 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 CLCN4P51793 760 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 CALCOCO2Q13137 446 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 GPM6BQ13491 265 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 P3H1Q32P28 736 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 PIK3R6Q5UE93 754 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 CCDC149Q6ZUS6 474 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 C14orf80Q86SX3 495 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 TMEM150AQ86TG1 271 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 TADA2BQ86TJ2 420 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 HS6ST3Q8IZP7 471 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 NPWQ8N729 165 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 FBXO25Q8TCJ0 367 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 SNF8Q96H20 258 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 CDK5RAP1Q96SZ6 601 aaKnown RBP12.85□□□□□ -0.35
CHMP3-204ENST00000409727 OSBPL2Q9H1P3 480 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 UXTQ9UBK9 157 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-204ENST00000409727 VANGL2Q9ULK5 521 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 MAFFQ9ULX9 164 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 E9PAM4 449 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 IRF1P10914 325 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 NR2C2P49116 596 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 TUBP50607 506 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 ITGA8P53708 1063 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 UBE3AQ05086 875 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 MS4A13Q5J8X5 152 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 PPM1LQ5SGD2 360 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 RAP1GAP2Q684P5 730 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 TXNDC8Q6A555 127 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 ZDHHC24Q6UX98 284 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 ELMOD1Q8N336 334 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 ATP6V0D2Q8N8Y2 350 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 CCNYQ8ND76 341 aa12.85□□□□□ -0.35
CHMP3-204ENST00000409727 CELF6Q96J87 481 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms