RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 RBL1P28749 1068 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 RPL22P35268 128 aaKnown RBP14.52□□□□□ -0.08
GPNMB-203ENST00000409458 ALDH1A3P47895 512 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 HCAR3P49019 387 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 PLD1Q13393 1074 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 PAFAH1B3Q15102 231 aaKnown RBP14.52□□□□□ -0.08
GPNMB-203ENST00000409458 FAM182AQ5T1J6 154 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 ARTNQ5T4W7 220 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 MIB1Q86YT6 1006 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 CDKL3Q8IVW4 592 aaPredicted RBP14.52□□□□□ -0.08
GPNMB-203ENST00000409458 LBHD1Q9BQE6 289 aaPredicted RBP14.52□□□□□ -0.08
GPNMB-203ENST00000409458 SIK2Q9H0K1 926 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 ADAM7Q9H2U9 754 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 USP29Q9HBJ7 922 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 ALG13Q9NP73 1137 aaKnown RBP14.52□□□□□ -0.08
GPNMB-203ENST00000409458 MARCH2Q9P0N8 246 aa14.52□□□□□ -0.08
GPNMB-203ENST00000409458 GBF1Q92538 1859 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 KCNN4O15554 427 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 TLR5O60602 858 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 PPFIA2O75334 1257 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 ARHGEF15O94989 841 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 ELF1P32519 619 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 CHKAP35790 457 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 BMPR1AP36894 532 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 ZNF135P52742 658 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-203ENST00000409458 DHX9Q08211 1270 aaKnown RBP14.52□□□□□ -0.09
GPNMB-203ENST00000409458 XRCC4Q13426 336 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 TRIP4Q15650 581 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-203ENST00000409458 UAP1Q16222 522 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-203ENST00000409458 SLC45A4Q5BKX6 768 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 MANEALQ5VSG8 457 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 HIBCHQ6NVY1 386 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-203ENST00000409458 SPRED2Q7Z698 418 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 TP53INP2Q8IXH6 220 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 TCEAL8Q8IYN2 117 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 NPWQ8N729 165 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 BBOF1Q8ND07 529 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 PDZD8Q8NEN9 1154 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 OVCA2Q8WZ82 227 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 LRRC45Q96CN5 670 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 RTP4Q96DX8 246 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 MYRFLQ96LU7 910 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 ZNF512Q96ME7 567 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-203ENST00000409458 TCF25Q9BQ70 676 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 C17orf80Q9BSJ5 609 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 MTIF3Q9H2K0 278 aaKnown RBP14.52□□□□□ -0.09
GPNMB-203ENST00000409458 ANAPC5Q9UJX4 755 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 SSX2IPQ9Y2D8 614 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 HS3ST4Q9Y661 456 aa14.52□□□□□ -0.09
GPNMB-203ENST00000409458 SLC12A8A0AV02 714 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 CFAP69A5D8W1 941 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 ZNF840PA6NDX5 716 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 TGM5O43548 720 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 CXCL14O95715 111 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 IGLV3-27P01718 113 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 SPATA31D3P0C874 917 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 SRGAP2BP0DMP2 458 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 MYOGP15173 224 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 VAV1P15498 845 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 DNAJB1P25685 340 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 EPHB2P29323 1055 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 HSD17B3P37058 310 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 ERVFC1P60507 584 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 CAV1Q03135 178 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 VEPH1Q14D04 833 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 C9orf50Q5SZB4 431 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 RNASEH2BQ5TBB1 312 aaKnown RBP14.51□□□□□ -0.09
GPNMB-203ENST00000409458 PIK3R6Q5UE93 754 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 SNX30Q5VWJ9 437 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 SPATA31D4Q6ZUB0 917 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 TMC7Q7Z402 723 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 DPF3Q92784 378 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 TRMT2BQ96GJ1 504 aaKnown RBP14.51□□□□□ -0.09
GPNMB-203ENST00000409458 TPX2Q9ULW0 747 aaKnown RBP14.51□□□□□ -0.09
GPNMB-203ENST00000409458 MAFFQ9ULX9 164 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 ATP8A1Q9Y2Q0 1164 aa14.51□□□□□ -0.09
GPNMB-203ENST00000409458 OBSL1O75147 1896 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 APOEP02649 317 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 HMBSP08397 361 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 SLC2A3P11169 496 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 HOXC13P31276 330 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 STIP1P31948 543 aaKnown RBP14.5□□□□□ -0.09
GPNMB-203ENST00000409458 PLPP4Q5VZY2 271 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 RWDD4Q6NW29 188 aaKnown RBP14.5□□□□□ -0.09
GPNMB-203ENST00000409458 C14orf80Q86SX3 495 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 TAB3Q8N5C8 712 aaPredicted RBP14.5□□□□□ -0.09
GPNMB-203ENST00000409458 TBC1D31Q96DN5 1066 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 PWWP2AQ96N64 755 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 KLHL5Q96PQ7 755 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 ENTPD7Q9NQZ7 604 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 TMEM51Q9NW97 253 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 LZTS1Q9Y250 596 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 NR2E3Q9Y5X4 410 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 ANAPC1Q9H1A4 1944 aa14.5□□□□□ -0.09
GPNMB-203ENST00000409458 GOLGA6BA6NDN3 693 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 GRXCR1A8MXD5 290 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 HACD1B0YJ81 288 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 AGPSO00116 658 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 EPHB3P54753 998 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms