RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 EGFLAMQ63HQ2 1017 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 IRF2BP2Q7Z5L9 587 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 C11orf70Q9BRQ4 267 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 NUCKS1Q9H1E3 243 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 TSPY26PQ9H489 355 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 STIM2Q9P246 746 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 XPO7Q9UIA9 1087 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 HCN2Q9UL51 889 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 STAP1Q9ULZ2 295 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 KIAA1549LQ6ZVL6 1849 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 CCDC163A0A0D9SF12 145 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 TYW5A2RUC4 315 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 KCNU1A8MYU2 1149 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 HRO43593 1189 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 UNGP13051 313 aaPredicted RBP18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 CNR2P34972 360 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 WASP42768 502 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 MS4A13Q5J8X5 152 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 MPP7Q5T2T1 576 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 SDE2Q6IQ49 451 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 LRSAM1Q6UWE0 723 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 TMEM92Q6UXU6 159 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 ANKS1BQ7Z6G8 1248 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 PHLDB2Q86SQ0 1253 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 CHPFQ8IZ52 775 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 NPY6RQ99463 290 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 EDEM3Q9BZQ6 932 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 EPC1Q9H2F5 836 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 RIF1Q5UIP0 2472 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 FANCMQ8IYD8 2048 aa18.6■□□□□ 0.57
PDLIM2-206ENST00000409141 AXIN1O15169 862 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 ADAM23O75077 832 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 F9P00740 461 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 TACR2P21452 398 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 TNFAIP3P21580 790 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 NTSR1P30989 418 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 SULT1E1P49888 294 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 CENPCQ03188 943 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 SRSF5Q13243 272 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 ASIC2Q16515 512 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 SFMBT2Q5VUG0 894 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 RAP1GAP2Q684P5 730 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 SND1Q7KZF4 910 aaKnown RBP eCLIP18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 CHSY1Q86X52 802 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 LGI2Q8N0V4 545 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 SUMF1Q8NBK3 374 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 HJURPQ8NCD3 748 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 UCMAQ8WVF2 138 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 ACOX2Q99424 681 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 POLMQ9NP87 494 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 ADAM22Q9P0K1 906 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 IFNKQ9P0W0 207 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 EBF1Q9UH73 591 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 TMEM59LQ9UK28 342 aa18.59■□□□□ 0.57
PDLIM2-206ENST00000409141 ALDH1A2O94788 518 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 HNRNPLP14866 589 aaKnown RBP eCLIP18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 TFE3P19532 575 aaPredicted RBP18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 FLT3P36888 993 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 RPS24P62847 133 aaKnown RBP18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 SIM2Q14190 667 aaPredicted RBP18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 SLC25A52Q3SY17 297 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 CEP68Q76N32 757 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 PHF13Q86YI8 300 aaPredicted RBP18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 CCDC117Q8IWD4 279 aaPredicted RBP18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 CFAP52Q8N1V2 620 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 NT5C3BQ969T7 300 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 MYEOVQ96EZ4 313 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 PRICKLE1Q96MT3 831 aaPredicted RBP18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 TBCBQ99426 244 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 NUP58Q9BVL2 599 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 TTYH3Q9C0H2 523 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 METTL5Q9NRN9 209 aaKnown RBP18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 PIGVQ9NUD9 493 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 ABCB8Q9NUT2 735 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 ELOVL2Q9NXB9 296 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 CALCOCO1Q9P1Z2 691 aa18.58■□□□□ 0.57
PDLIM2-206ENST00000409141 MYO18AQ92614 2054 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 F5H5T6 163 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 TIMM44O43615 452 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 CALB1P05937 261 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 HLA-FP30511 346 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 PBX1P40424 430 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 DEUP1Q05D60 604 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 MTA1Q13330 715 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 EIF4HQ15056 248 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 FIGNQ5HY92 759 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 OTUD1Q5VV17 481 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 ANO7Q6IWH7 933 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 PRR23BQ6ZRT6 265 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 ARCQ7LC44 396 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 MFN1Q8IWA4 741 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 CARNMT1Q8N4J0 409 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 ZNF557Q8N988 423 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 PGAP3Q96FM1 320 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 CIPCQ9C0C6 399 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 WDCPQ9H6R7 721 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 AIPL1Q9NZN9 384 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 RAB23Q9ULC3 237 aa18.58■□□□□ 0.56
PDLIM2-206ENST00000409141 PTPRZ1P23471 2315 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 HOXB2P14652 356 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms