RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DTNAQ9Y4J8 743 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 TRIP11Q15643 1979 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 H0YCG3 227 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 RNF103O00237 685 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 PLSCR1O15162 318 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 PRPF4O43172 522 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNX13-201ENST00000409076 DNAJA2O60884 412 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 GPC4O75487 556 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 PTPRAP18433 802 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 LMO2P25791 158 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SLC12A2P55011 1212 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 CSE1LP55060 971 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 HADHBP55084 474 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 FLOT2Q14254 428 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 NOMO1Q15155 1222 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 NOMO2Q5JPE7 1267 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 WASHC2DQ5SRD0 308 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 CES4AQ5XG92 561 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 LRRC8EQ6NSJ5 796 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 MYLK4Q86YV6 388 aaPredicted RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 PLD6Q8N2A8 252 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 SLC35B2Q8TB61 432 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 GPRASP2Q96D09 838 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 ACO2Q99798 780 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 ECSITQ9BQ95 431 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 OCEL1Q9H607 264 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 KRT82Q9NSB4 513 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SETD4Q9NVD3 440 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 GIMAP2Q9UG22 337 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 PIN4Q9Y237 131 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 SNX13Q9Y5W8 968 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 KNL1Q8NG31 2342 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 KLRG2A4D1S0 409 aaPredicted RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 FAM149AA5PLN7 773 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 MAGEA13PA6NCF6 341 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 NCF1BA6NI72 391 aaPredicted RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 SPDYE16A6NNV3 312 aaPredicted RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 ZBBXA8MT70 800 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 NCF1CA8MVU1 366 aaPredicted RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 JCHAINP01591 159 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 LTFP02788 710 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 DLDP09622 509 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 PIRTP0C851 137 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SPATA31D3P0C874 917 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 NCF1P14598 390 aaPredicted RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 TGM2P21980 687 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 NR4A1P22736 598 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 ASPAP45381 313 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 MAP3K7CLP57077 242 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SLC25A11Q02978 314 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 PTP4A2Q12974 167 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 FUT11Q495W5 492 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SLC9B1Q4ZJI4 515 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SPDYCQ5MJ68 293 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 KRT80Q6KB66 452 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 MPZL3Q6UWV2 235 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SPATA31D4Q6ZUB0 917 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 DEFB106AQ8N104 65 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SIX6OS1Q8N1H7 587 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 AFG1LQ8WV93 481 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SLC44A1Q8WWI5 657 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 BHMTQ93088 406 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 RCN3Q96D15 328 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 RNF157Q96PX1 679 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 TBCBQ99426 244 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 RHOBTB2Q9BYZ6 727 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 CCDC167Q9P0B6 97 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 HBS1LQ9Y450 684 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 TLL2Q9Y6L7 1015 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 EVPLQ92817 2033 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 SIGLEC16A6NMB1 481 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 LMNAP02545 664 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 P4HA1P13674 534 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 GNAZP19086 355 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 CES1P23141 567 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 MYBPC2Q14324 1141 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 KIF19Q2TAC6 998 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 CROCCQ5TZA2 2017 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 DCAF15Q66K64 600 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 TRNP1Q6NT89 227 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 FRMD7Q6ZUT3 714 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 OR6P1Q8NGX9 317 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 LPAR1Q92633 364 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 EME1Q96AY2 570 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 HDAC11Q96DB2 347 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 CDHR1Q96JP9 859 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 OR52B2Q96RD2 323 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 TMEM165Q9HC07 324 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 PCDH18Q9HCL0 1135 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 PCDHGB4Q9UN71 923 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 TDRKHQ9Y2W6 561 aaKnown RBP8.56□□□□□ -1.04
SNX13-201ENST00000409076 PCDHGB5Q9Y5G0 923 aa8.56□□□□□ -1.04
SNX13-201ENST00000409076 A0A1B0GTW7 788 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 MFSD11O43934 449 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 IQCF3P0C7M6 154 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 MRPS5P82675 430 aaKnown RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 OCRLQ01968 901 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 DGKDQ16760 1214 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 WDR49Q8IV35 697 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 CENPKQ9BS16 269 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms