RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 ITGA8P53708 1063 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 NSUN2Q08J23 767 aaKnown RBP eCLIP1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 SNTA1Q13424 505 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 KRT72Q14CN4 511 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 ZDHHC20Q5W0Z9 365 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 SWSAP1Q6NVH7 229 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 LHFPL2Q6ZUX7 228 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 GAS2L3Q86XJ1 694 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 RHPN2Q8IUC4 686 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 HOMEZQ8IX15 550 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 NAGSQ8N159 534 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 DNAJC5GQ8N7S2 189 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 MAB21L3Q8N8X9 362 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 DNAJC2Q99543 621 aaKnown RBP1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 SENP7Q9BQF6 1050 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 RBM4Q9BWF3 364 aaKnown RBP1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 MS4A7Q9GZW8 240 aaPredicted RBP1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 CATSPERBQ9H7T0 1116 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 CCDC177Q9NQR7 707 aaPredicted RBP1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 FNIP2Q9P278 1114 aa1.86□□□□□ -2.11
MIR548I3-201ENST00000408378 GAGE12JA6NER3 117 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 H3BUI4 141 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 AGPSO00116 658 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 AFPP02771 609 aaKnown RBP1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 WEE2P0C1S8 567 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 TMIGD3P0DMS9 266 aaPredicted RBP1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 NR0B1P51843 470 aaKnown RBP1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 KLF1Q13351 362 aaPredicted RBP1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 KHDC1LQ5JSQ8 128 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 ARHGAP11AQ6P4F7 1023 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 LRIG3Q6UXM1 1119 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 Q6ZSV7 163 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 MPP5Q8N3R9 675 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 PAQR4Q8N4S7 273 aaPredicted RBP1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 ZNF248Q8NDW4 579 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 ENGASEQ8NFI3 743 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 FAM216AQ8WUB2 273 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 SECTM1Q8WVN6 248 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 SAP30LQ9HAJ7 183 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 SPAG4Q9NPE6 437 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 MKS1Q9NXB0 559 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 SLC8A2Q9UPR5 921 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 TCF19Q9Y242 345 aa1.85□□□□□ -2.11
MIR548I3-201ENST00000408378 KLHL33A6NCF5 533 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 A8MVJ9 347 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 TULP2O00295 520 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 P2RY10O00398 339 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 PHGDHO43175 533 aaKnown RBP1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 AKR1A1P14550 325 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 CDKN1AP38936 164 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 GATMP50440 423 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 AGFG1P52594 562 aaKnown RBP1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 SELENOVP59797 346 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 GAB1Q13480 694 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 PLEKHO1Q53GL0 409 aaPredicted RBP1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 CCDC157Q569K6 752 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 EMC10Q5UCC4 262 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 SLC26A9Q7LBE3 791 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 KCTD20Q7Z5Y7 419 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 ANKRD52Q8NB46 1076 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 APOLD1Q96LR9 279 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 TRIM36Q9NQ86 728 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 RIMKLBQ9ULI2 386 aa1.84□□□□□ -2.11
MIR548I3-201ENST00000408378 FAM172BPA6NC97 362 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 TRIM75PA6NK02 468 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 PRYO14603 147 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 CD3EAPO15446 510 aaKnown RBP1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 SLC3A2P08195 630 aaKnown RBP1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 PGDP52209 483 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 POLE2P56282 527 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 TIAL1Q01085 375 aaKnown RBP eCLIP1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 HNF4GQ14541 408 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 TMEM30BQ3MIR4 351 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 XKR6Q5GH73 641 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 THEMIS2Q5TEJ8 643 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 ZNF367Q7RTV3 350 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 PJA1Q8NG27 643 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 USP13Q92995 863 aaPredicted RBP1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 ZNF501Q96CX3 271 aaPredicted RBP1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 ZNF419Q96HQ0 510 aaPredicted RBP1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 C8orf37Q96NL8 207 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 PAK5Q9P286 719 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 CPA4Q9UI42 421 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 CDY1Q9Y6F8 540 aa1.83□□□□□ -2.12
MIR548I3-201ENST00000408378 TMEM233B4DJY2 109 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 FAM72CH0Y354 149 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 VWA5AO00534 786 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 MT-CO1P00395 513 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 EIF4A1P60842 406 aaKnown RBP1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 ZP1P60852 638 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 BNC1Q01954 994 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 PLS1Q14651 629 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 ANXA2RQ3ZCQ2 193 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 TTC39AQ5SRH9 613 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 ZC2HC1BQ5TFG8 222 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 FAM72AQ5TYM5 149 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 FAM72DQ6L9T8 149 aa1.82□□□□□ -2.12
MIR548I3-201ENST00000408378 FAM72BQ86X60 149 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms