RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 MAN2A1Q16706 1144 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 TRIM61Q5EBN2 209 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 TAC4Q86UU9 113 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 ADIPOR2Q86V24 386 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 CYB5D2Q8WUJ1 264 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 DDX1Q92499 740 aaKnown RBP20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 SERPINB11Q96P15 392 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 PRDM16Q9HAZ2 1276 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 TLR6Q9Y2C9 796 aa20.05■□□□□ 0.8
SMARCB1-204ENST00000407422 ACACBO00763 2458 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 CDX4O14627 284 aaPredicted RBP20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 TIMM44O43615 452 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 SYNCRIPO60506 623 aaKnown RBP20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 PNMA6AP0CW24 399 aaPredicted RBP20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 HLA-EP13747 358 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 ANP32AP39687 249 aaKnown RBP20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 ZNF33AQ06730 810 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 MIIPQ5JXC2 388 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 SERPINA13PQ6UXR4 307 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 CHST9Q7L1S5 443 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 PASD1Q8IV76 773 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 SLC41A1Q8IVJ1 513 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 AZIN2Q96A70 460 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 SLC39A13Q96H72 371 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 PRICKLE1Q96MT3 831 aaPredicted RBP20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 LSM14BQ9BX40 385 aaKnown RBP20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 NDST4Q9H3R1 872 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 LMBRD1Q9NUN5 540 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 GGA2Q9UJY4 613 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 DNAJC12Q9UKB3 198 aa20.04■□□□□ 0.8
SMARCB1-204ENST00000407422 FOXN3O00409 490 aaPredicted RBP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 CAPN9O14815 690 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 ADRB1P08588 477 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 PRKCSHP14314 528 aaPredicted RBP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 ERCC5P28715 1186 aaPredicted RBP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 CD70P32970 193 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 YWHAZP63104 245 aaKnown RBP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 PITX1P78337 314 aaPredicted RBP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 ARID5AQ03989 594 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 VWA3BQ502W6 1294 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 DPY19L2P1Q6NXN4 242 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 KIAA0907Q7Z7F0 614 aaPredicted RBP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 TMPRSS6Q8IU80 811 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 CPXM1Q96SM3 734 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 TUBGCP2Q9BSJ2 902 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 NUCKS1Q9H1E3 243 aaKnown RBP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 FSCN3Q9NQT6 498 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 STIM2Q9P246 746 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 EVLQ9UI08 416 aaPredicted RBP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 XPO7Q9UIA9 1087 aaKnown RBP20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 NUMA1Q14980 2115 aa20.03■□□□□ 0.8
SMARCB1-204ENST00000407422 IRAK2O43187 625 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 MOCS2O96007 188 aaPredicted RBP20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 EPHX1P07099 455 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 PABPC1P11940 636 aaKnown RBP20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 COPAP53621 1224 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 RPS24P62847 133 aaKnown RBP20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 NNTQ13423 1086 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 MPP7Q5T2T1 576 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 PEAR1Q5VY43 1037 aaPredicted RBP20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 CLEC17AQ6ZS10 378 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 BEND5Q7L4P6 421 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 CACUL1Q86Y37 369 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 FAM114A1Q8IWE2 563 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 ZNF366Q8N895 744 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 WFIKKN2Q8TEU8 576 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 HSPA12BQ96MM6 686 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 POPDC2Q9HBU9 364 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 TMEM9BQ9NQ34 198 aa20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 SAMSN1Q9NSI8 373 aaKnown RBP20.02■□□□□ 0.8
SMARCB1-204ENST00000407422 KCNJ18B7U540 433 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 CLCN1P35523 988 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 PTPRNQ16849 979 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 ZC3H12AQ5D1E8 599 aaKnown RBP20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 MBLAC2Q68D91 279 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 SLC47A2Q86VL8 602 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 AHI1Q8N157 1196 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 CFAP52Q8N1V2 620 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 TMEM245Q9H330 911 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 USP36Q9P275 1121 aaKnown RBP20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 PCDHGC3Q9UN70 934 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 PLA2G4CQ9UP65 541 aa20.02■□□□□ 0.79
SMARCB1-204ENST00000407422 NDUFS2O75306 463 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 TRUB2O95900 331 aaKnown RBP20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 IGLV3-25P01717 112 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 CFIP05156 583 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 PTK2Q05397 1052 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 KCNMA1Q12791 1236 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 E2F5Q15329 346 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 CACNA1EQ15878 2313 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 FNDC3BQ53EP0 1204 aaKnown RBP20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 SLC23A3Q6PIS1 610 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 METTL3Q86U44 580 aaKnown RBP20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 MFN1Q8IWA4 741 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 HJURPQ8NCD3 748 aaPredicted RBP20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 SIPA1Q96FS4 1042 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 TOE1Q96GM8 510 aaKnown RBP20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 ZNF419Q96HQ0 510 aaPredicted RBP20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 PPP1R13BQ96KQ4 1090 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms