RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 ANO10Q9NW15 660 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 RAB20Q9NX57 234 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 TMEM63CQ9P1W3 806 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 SUSD2Q9UGT4 822 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 FBXO10Q9UK96 956 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 PCDHGB2Q9Y5G2 931 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 RAI2Q9Y5P3 530 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 USP9YO00507 2555 aaPredicted RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 MUC22E2RYF6 1773 aaPredicted RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 CRYBG3Q68DQ2 2970 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 ITPR2Q14571 2701 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 EIF4E1BA6NMX2 242 aaKnown RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 METTL12A8MUP2 240 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 GFRA2O00451 464 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 ATXN7O15265 892 aaPredicted RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 BCAT2O15382 392 aaPredicted RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 NDUFS2O75306 463 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 TACC1O75410 805 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 TBX18O95935 607 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 ASS1P00966 412 aaKnown RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 IGLV3-19P01714 112 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 AFPP02771 609 aaKnown RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 NCAM1P13591 858 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 TYRP14679 529 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 PTPN1P18031 435 aaKnown RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 PTMSP20962 102 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 ACO1P21399 889 aaKnown RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 ANXA13P27216 316 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 MTIF2P46199 727 aaKnown RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 FMO5P49326 533 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 MXI1P50539 228 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 TUBP50607 506 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 TPMTP51580 245 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 MCCD1P59942 119 aaPredicted RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 CETN1Q12798 172 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 KCNH2Q12809 1159 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 ENPP2Q13822 863 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 FUT11Q495W5 492 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 CBWD6Q4V339 395 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 HSP90AA4PQ58FG1 418 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 CT47A1Q5JQC4 288 aaPredicted RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 CBWD3Q5JTY5 395 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 KCNT1Q5JUK3 1230 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 CBWD5Q5RIA9 395 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 HECTD3Q5T447 861 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 DCAF12L1Q5VU92 463 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 BTBD8Q5XKL5 378 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 GRAMD4Q6IC98 578 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 HTR3DQ70Z44 454 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 NUP93Q8N1F7 819 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 RBBP8NLQ8NC74 664 aaPredicted RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 FBXL13Q8NEE6 735 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 CADM4Q8NFZ8 388 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 PIP4K2CQ8TBX8 421 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 RHBDD1Q8TEB9 315 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 OVCA2Q8WZ82 227 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 TATDN2Q93075 761 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 SLITRK1Q96PX8 696 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 GPR174Q9BXC1 333 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 KLF16Q9BXK1 252 aaPredicted RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 IMPG2Q9BZV3 1241 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 SDCBP2Q9H190 292 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 SMYD3Q9H7B4 428 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 VRTNQ9H8Y1 702 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 APOBEC3GQ9HC16 384 aaKnown RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 DNAJC17Q9NVM6 304 aaKnown RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 OSER1Q9NX31 292 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 EHD2Q9NZN4 543 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 MARK1Q9P0L2 795 aa6.51□□□□□ -1.37
RPA3-204ENST00000406109 EIF2B4Q9UI10 523 aaKnown RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.51□□□□□ -1.37
RPA3-204ENST00000406109 TP53BP1Q12888 1972 aaPredicted RBP6.51□□□□□ -1.37
RPA3-204ENST00000406109 DOCK9Q9BZ29 2069 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 A0A1B0GVT2 93 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 NEDD8-MDP1E9PL57 170 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 PLK4O00444 970 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 KCNK3O14649 394 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 FLRT2O43155 660 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 TLX3O43711 291 aaPredicted RBP6.5□□□□□ -1.37
RPA3-204ENST00000406109 BEST1O76090 585 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 LETM1O95202 739 aaPredicted RBP6.5□□□□□ -1.37
RPA3-204ENST00000406109 CER1O95813 267 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 IRF1P10914 325 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 CD58P19256 250 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 EIF2S3P41091 472 aaKnown RBP6.5□□□□□ -1.37
RPA3-204ENST00000406109 MATKP42679 507 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 IL12RB1P42701 662 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 CSNK1EP49674 416 aaKnown RBP6.5□□□□□ -1.37
RPA3-204ENST00000406109 NDST1P52848 882 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 COPAP53621 1224 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 SLC5A3P53794 718 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 CLDN6P56747 220 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 IFRD2Q12894 506 aaPredicted RBP6.5□□□□□ -1.37
RPA3-204ENST00000406109 ORC1Q13415 861 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 KIF19Q2TAC6 998 aa6.5□□□□□ -1.37
RPA3-204ENST00000406109 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
RPA3-204ENST00000406109 PREPLQ4J6C6 727 aaPredicted RBP6.5□□□□□ -1.37
RPA3-204ENST00000406109 KIAA1324Q6UXG2 1013 aaKnown RBP6.5□□□□□ -1.37
RPA3-204ENST00000406109 RBM43Q6ZSC3 357 aaKnown RBP6.5□□□□□ -1.37
RPA3-204ENST00000406109 ACOT1Q86TX2 421 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms