RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 KCNJ12Q14500 433 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 TAF5Q15542 800 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 AARS2Q5JTZ9 985 aaKnown RBP5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 CCDC144NLQ6NUI1 221 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 PCSK4Q6UW60 755 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 KIRREL2Q6UWL6 708 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 OLFML1Q6UWY5 402 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 NRSN1Q8IZ57 195 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 SLC16A11Q8NCK7 471 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 SLC22A17Q8WUG5 538 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 SLC9A6Q92581 669 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 VPS50Q96JG6 964 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 RTKNQ9BST9 563 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 PABPC3Q9H361 631 aaKnown RBP5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 ITM2CQ9NQX7 267 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 ASB6Q9NWX5 421 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 ADAM21Q9UKJ8 722 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 GPR52Q9Y2T5 361 aa5.69□□□□□ -1.5
HMGB3P19-201ENST00000403971 FAM90A18PA6NE21 464 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 FAM90A16PA6NEW6 464 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 FAM90A9PA6NNJ1 464 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 FAM90A5PA8MXJ8 464 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 KIF28PB7ZC32 967 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 M0R3H8 397 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 CTIFO43310 598 aaKnown RBP5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 PRAMEF2O60811 474 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 PPP6R2O75170 966 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 FAM90A15PP0C7V4 464 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 FAM90A14PP0C7W9 464 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 PEPDP12955 493 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 SEMA3BQ13214 749 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 CSHL1Q14406 222 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 TBC1D25Q3MII6 688 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 TANGO2Q6ICL3 276 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 RRAGAQ7L523 313 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 AMIGO2Q86SJ2 522 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 TTC30AQ86WT1 665 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 SLC44A2Q8IWA5 706 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 CCDC117Q8IWD4 279 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 CLASRPQ8N2M8 674 aaKnown RBP5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 SIMC1Q8NDZ2 872 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 OTUD7AQ8TE49 926 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 SCLT1Q96NL6 688 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 MMS19Q96T76 1030 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 CPNE5Q9HCH3 593 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 PRDM8Q9NQV8 689 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 VPS45Q9NRW7 570 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 SRP68Q9UHB9 627 aaKnown RBP5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 DAPP1Q9UN19 280 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 VPS4AQ9UN37 437 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 ENTPD2Q9Y5L3 495 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 LMTK3Q96Q04 1460 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 ASXL1Q8IXJ9 1541 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 DLC1Q96QB1 1528 aa5.68□□□□□ -1.5
HMGB3P19-201ENST00000403971 USP47Q96K76 1375 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 PIK3R4Q99570 1358 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 STRCQ7RTU9 1775 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 ADAMTS13Q76LX8 1427 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 QRICH2Q9H0J4 1663 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 HMX3A6NHT5 357 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 GCOM1H8Y6P7 765 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 M0QYT0 321 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 CREB3O43889 395 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 TMPRSS11DO60235 418 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 EXOC3O60645 756 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 SLPIP03973 132 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 HNRNPCP07910 306 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 DHRS4L1P0CG22 281 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 RENBPP51606 427 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 COPB1P53618 953 aaKnown RBP5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 PRKAA2P54646 552 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 AP2B1P63010 937 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 FAM153CQ494X1 144 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 PRR16Q569H4 304 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 ZNF362Q5T0B9 420 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 GRASPQ7Z6J2 395 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 GALNT15Q8N3T1 639 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 RILPL2Q969X0 211 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 EIF3CQ99613 913 aaKnown RBP5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 MECRQ9BV79 373 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 CIPCQ9C0C6 399 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 KLK15Q9H2R5 256 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 SYNPO2LQ9H987 977 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 USP29Q9HBJ7 922 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 SNX15Q9NRS6 342 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 TLK1Q9UKI8 766 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 DMRT1Q9Y5R6 373 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 DGKBQ9Y6T7 804 aa5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 EIF3AQ14152 1382 aaKnown RBP5.67□□□□□ -1.5
HMGB3P19-201ENST00000403971 TECPR2O15040 1411 aa5.66□□□□□ -1.5
HMGB3P19-201ENST00000403971 YTHDC2Q9H6S0 1430 aaKnown RBP5.66□□□□□ -1.5
HMGB3P19-201ENST00000403971 XRN1Q8IZH2 1706 aaKnown RBP5.66□□□□□ -1.5
HMGB3P19-201ENST00000403971 CPS1P31327 1500 aa5.66□□□□□ -1.5
HMGB3P19-201ENST00000403971 MBPP02686 304 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P19-201ENST00000403971 MYCLP12524 364 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P19-201ENST00000403971 PPM1FP49593 454 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P19-201ENST00000403971 DGKQP52824 942 aa5.66□□□□□ -1.5
HMGB3P19-201ENST00000403971 CACNA2D1P54289 1103 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms