RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TXNRD2Q9NNW7 524 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 ADAMTS6Q9UKP5 1117 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 RPL26L1Q9UNX3 145 aaKnown RBP12.34□□□□□ -0.43
RBM39-206ENST00000403542 MAGEA13PA6NCF6 341 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 FAM159BA6NKW6 160 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 KLF11O14901 512 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 SNNO75324 88 aaPredicted RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 FGF3P11487 239 aaPredicted RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 PSMB4P28070 264 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 L1CAMP32004 1257 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 CRHR1P34998 444 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 CPOXP36551 454 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 RAP1GDS1P52306 607 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 AQP4P55087 323 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 LBRQ14739 615 aaKnown RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 STILQ15468 1287 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 SFT2D3Q587I9 215 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 DALRD3Q5D0E6 543 aaKnown RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 CELF3Q5SZQ8 465 aaKnown RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 MBLAC2Q68D91 279 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 LBX2Q6XYB7 198 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 NET1Q7Z628 596 aaPredicted RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 PLD6Q8N2A8 252 aaKnown RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 CHST13Q8NET6 341 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 MMADHCQ9H3L0 296 aaPredicted RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 SYBUQ9NX95 663 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 UBP1Q9NZI7 540 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 TUBGCP4Q9UGJ1 667 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 A8MXQ7 604 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 MAGEC1O60732 1142 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 SERPINA6P08185 405 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 P4HA1P13674 534 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 SERPINB5P36952 375 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 SLC6A3Q01959 620 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 NME3Q13232 169 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 TRIP10Q15642 601 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 KIZQ2M2Z5 673 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 TRMT5Q32P41 509 aaKnown RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 GRAMD1BQ3KR37 738 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 RABGAP1LQ5R372 815 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 FRMD7Q6ZUT3 714 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 CTU1Q7Z7A3 348 aaKnown RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 MYLK4Q86YV6 388 aaPredicted RBP12.33□□□□□ -0.44
RBM39-206ENST00000403542 TRIM42Q8IWZ5 723 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 FAM167AQ96KS9 214 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 MARK4Q96L34 752 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 CSPG4P5Q96PW8 444 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 AGAP2Q99490 1192 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 KLK14Q9P0G3 267 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 HESX1Q9UBX0 185 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 TNFSF13BQ9Y275 285 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 ASB3Q9Y575 518 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 PCDHA11Q9Y5I1 949 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 PHIPQ8WWQ0 1821 aa12.33□□□□□ -0.44
RBM39-206ENST00000403542 BCLAF3A2AJT9 711 aaKnown RBP12.32□□□□□ -0.44
RBM39-206ENST00000403542 TRDMT1O14717 391 aaKnown RBP12.32□□□□□ -0.44
RBM39-206ENST00000403542 MFSD11O43934 449 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 IL18RAPO95256 599 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 FESP07332 822 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 LMO2P25791 158 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 COPAP53621 1224 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 IRF9Q00978 393 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 DLG1Q12959 904 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 PCLAFQ15004 111 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 PDK2Q15119 407 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 EFHC1Q5JVL4 640 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 AP1ARQ63HQ0 302 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 SLC9A4Q6AI14 798 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 PACS1Q6VY07 963 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 ZMAT2Q96NC0 199 aaKnown RBP12.32□□□□□ -0.44
RBM39-206ENST00000403542 TBCBQ99426 244 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 FAM49AQ9H0Q0 323 aaPredicted RBP12.32□□□□□ -0.44
RBM39-206ENST00000403542 WDR55Q9H6Y2 383 aaPredicted RBP12.32□□□□□ -0.44
RBM39-206ENST00000403542 PNPLA8Q9NP80 782 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 SNTG2Q9NY99 539 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 ZNF180Q9UJW8 692 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 PPME1Q9Y570 386 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 RPS6KL1Q9Y6S9 549 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 RNF103O00237 685 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 AIM2O14862 343 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 IRF6O14896 467 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 CLGNO14967 610 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 CFLARO15519 480 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 ATP9BO43861 1147 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 AMHP03971 560 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 ITGA2BP08514 1039 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 TSHRP16473 764 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 TPH1P17752 444 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 TGM2P21980 687 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 AKAP5P24588 427 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 IDH3AP50213 366 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 INHBEP58166 350 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 DNAL1Q4LDG9 190 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 FAM219BQ5XKK7 198 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 PDPK2PQ6A1A2 396 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 CDKL3Q8IVW4 592 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms