RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 OR6B2Q6IFH4 312 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 AAGABQ6PD74 315 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 CYS1Q717R9 158 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 TMEM192Q8IY95 271 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 UBA3Q8TBC4 463 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 PIWIL1Q96J94 861 aaKnown RBP20.45■□□□□ 0.86
CCDC47-202ENST00000403162 HEXIM2Q96MH2 286 aaKnown RBP20.45■□□□□ 0.86
CCDC47-202ENST00000403162 TBCBQ99426 244 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 ZNF487B1APH4 448 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 ITGB3P05106 788 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 RBBP5Q15291 538 aaKnown RBP20.44■□□□□ 0.86
CCDC47-202ENST00000403162 CCDC14Q49A88 953 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 AP1ARQ63HQ0 302 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 CDKL3Q8IVW4 592 aaPredicted RBP20.44■□□□□ 0.86
CCDC47-202ENST00000403162 ADGRF2Q8IZF7 708 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 OR6J1Q8NGC5 347 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 AFG1LQ8WV93 481 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 EBF4Q9BQW3 602 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 ZNF670Q9BS34 389 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 TNFSF13BQ9Y275 285 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 A0A088AWK7 358 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 GCATO75600 419 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 LYNP07948 512 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 P4HA1P13674 534 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 TUBB3Q13509 450 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 UBAP2LQ14157 1087 aaKnown RBP20.44■□□□□ 0.86
CCDC47-202ENST00000403162 LCLAT1Q6UWP7 414 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 WDR75Q8IWA0 830 aaKnown RBP20.44■□□□□ 0.86
CCDC47-202ENST00000403162 PPTC7Q8NI37 304 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 EMID1Q96A84 441 aaPredicted RBP20.44■□□□□ 0.86
CCDC47-202ENST00000403162 GPATCH2LQ9NWQ4 482 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 MAD1L1Q9Y6D9 718 aa20.44■□□□□ 0.86
CCDC47-202ENST00000403162 MDM4O15151 490 aa20.43■□□□□ 0.86
CCDC47-202ENST00000403162 GSRP00390 522 aa20.43■□□□□ 0.86
CCDC47-202ENST00000403162 ELNP15502 786 aa20.43■□□□□ 0.86
CCDC47-202ENST00000403162 CYP3A5P20815 502 aa20.43■□□□□ 0.86
CCDC47-202ENST00000403162 TRIM50Q86XT4 487 aa20.43■□□□□ 0.86
CCDC47-202ENST00000403162 ACMSDQ8TDX5 336 aa20.43■□□□□ 0.86
CCDC47-202ENST00000403162 DEPDC1BQ8WUY9 529 aa20.43■□□□□ 0.86
CCDC47-202ENST00000403162 LENG1Q96BZ8 264 aaPredicted RBP20.43■□□□□ 0.86
CCDC47-202ENST00000403162 MOCS1Q9NZB8 636 aa20.43■□□□□ 0.86
CCDC47-202ENST00000403162 PPM1HQ9ULR3 514 aa20.43■□□□□ 0.86
CCDC47-202ENST00000403162 LACTBL1A8MY62 500 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 INO80B-WBP1J3KQ70 363 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 DYNC1LI2O43237 492 aaPredicted RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 GNRH1P01148 92 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 INCA1Q0VD86 236 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 ARHGEF6Q15052 776 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 TMEM132AQ24JP5 1023 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 FASTKD1Q53R41 847 aaKnown RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 RABGAP1LQ5R372 815 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 MBLAC2Q68D91 279 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 JADE1Q6IE81 842 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 ZCCHC23Q6ZST2 131 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 CDR2LQ86X02 465 aaPredicted RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 TMEM130Q8N3G9 435 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 MPP5Q8N3R9 675 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 PIWIL2Q8TC59 973 aaKnown RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 RAET1EQ8TD07 263 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 SNRNP25Q9BV90 132 aaKnown RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 GCOM2Q9BZD3 368 aaPredicted RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 INO80BQ9C086 356 aaPredicted RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 BARX2Q9UMQ3 279 aaPredicted RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 BUD23O43709 281 aaKnown RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 LGR5O75473 907 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 CSDE1O75534 798 aaKnown RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 METTL18O95568 372 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 L1CAMP32004 1257 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 CDC16Q13042 620 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 TRIM32Q13049 653 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 HNRNPDQ14103 355 aaKnown RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 HIC1Q14526 733 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 SCYL2Q6P3W7 929 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 SESTD1Q86VW0 696 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 TRPV1Q8NER1 839 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 ZNF778Q96MU6 729 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 TTC1Q99614 292 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 TRIM56Q9BRZ2 755 aaKnown RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 FAM124BQ9H5Z6 455 aaPredicted RBP20.42■□□□□ 0.86
CCDC47-202ENST00000403162 KIAA1257Q9ULG3 409 aa20.42■□□□□ 0.86
CCDC47-202ENST00000403162 GRAP2O75791 330 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 KLHL2O95198 593 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 PFKMP08237 780 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 C6orf222P0C671 652 aaPredicted RBP20.41■□□□□ 0.86
CCDC47-202ENST00000403162 UBTFL6P0CB48 400 aaPredicted RBP20.41■□□□□ 0.86
CCDC47-202ENST00000403162 MBTD1Q05BQ5 628 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 CA9Q16790 459 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 TEDDM1Q5T9Z0 273 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 STEAP4Q687X5 459 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 MTHFD1LQ6UB35 978 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 MARK2Q7KZI7 788 aaKnown RBP20.41■□□□□ 0.86
CCDC47-202ENST00000403162 PPP1R14CQ8TAE6 165 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 FAM172AQ8WUF8 416 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 PPP2R3CQ969Q6 453 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 NLRP4Q96MN2 994 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 GBP5Q96PP8 586 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 NRDE2Q9H7Z3 1164 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 NGRNQ9NPE2 291 aaKnown RBP20.41■□□□□ 0.86
CCDC47-202ENST00000403162 TSPAN16Q9UKR8 245 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 GNEQ9Y223 722 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms