RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 BFARQ9NZS9 450 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 DNAJC16Q9Y2G8 782 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 E7ESA3 106 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 SMNDC1O75940 238 aaKnown RBP eCLIP7.92□□□□□ -1.14
HDAC9-201ENST00000401921 ATXN8OSP0DMR3 200 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 CYP2B6P20813 491 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 GABRB2P47870 512 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 SERPINB9P50453 376 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 MCCD1P59942 119 aaPredicted RBP7.92□□□□□ -1.14
HDAC9-201ENST00000401921 BEX3Q00994 111 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 ROR2Q01974 943 aaKnown RBP7.92□□□□□ -1.14
HDAC9-201ENST00000401921 LRRC36Q1X8D7 754 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 FASTKD1Q53R41 847 aaKnown RBP7.92□□□□□ -1.14
HDAC9-201ENST00000401921 MFSD4BQ5TF39 518 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 C9orf57Q5W0N0 161 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 CAND1Q86VP6 1230 aaKnown RBP7.92□□□□□ -1.14
HDAC9-201ENST00000401921 ANKRD52Q8NB46 1076 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 FGD4Q96M96 766 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 PGLYRP2Q96PD5 576 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 KCTD15Q96SI1 283 aaPredicted RBP7.92□□□□□ -1.14
HDAC9-201ENST00000401921 AP5M1Q9H0R1 490 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 DDIT4Q9NX09 232 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 CORO1CQ9ULV4 474 aaPredicted RBP7.92□□□□□ -1.14
HDAC9-201ENST00000401921 PLLPQ9Y342 182 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 FIS1Q9Y3D6 152 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 TRIP11Q15643 1979 aa7.92□□□□□ -1.14
HDAC9-201ENST00000401921 SMIM28A0A1B0GU29 152 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TRDMT1O14717 391 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 HSPA4LO95757 839 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ITGBL1O95965 494 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 CCNB1P14635 433 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SMPD1P17405 629 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 L1CAMP32004 1257 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ACADSBP45954 432 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TKTL1P51854 596 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SLC10A2Q12908 348 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 OLIG2Q13516 323 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 WSCD1Q658N2 575 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ASRGL1Q7L266 308 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 RNF139Q8WU17 664 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SLC35F5Q8WV83 523 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 UTP4Q969X6 686 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 POPDC2Q9HBU9 364 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ACSS2Q9NR19 701 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SAR1AQ9NR31 198 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SLC5A4Q9NY91 659 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 DTLQ9NZJ0 730 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ZMYND8Q9ULU4 1186 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 INPP5FQ9Y2H2 1132 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 LTBP3Q9NS15 1303 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 BCLAF3A2AJT9 711 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 RRN3P2A6NIE6 340 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 MEI4A8MW99 385 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TPP1O14773 563 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TPD52L2O43399 206 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 MFSD11O43934 449 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 KRT36O76013 467 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 POLBP06746 335 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 PFKMP08237 780 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 T-ENOLP0DO92 83 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 IL4RP24394 825 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 GMPRP36959 345 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SLC18A1P54219 525 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 PITX1P78337 314 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 PDK1Q15118 436 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 PARP6Q2NL67 630 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TAPT1Q6NXT6 567 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 CTU1Q7Z7A3 348 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SDCCAG8Q86SQ7 713 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ZNF410Q86VK4 478 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ANKLE1Q8NAG6 615 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TTC16Q8NEE8 873 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 OR52K1Q8NGK4 314 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 DNAJC9Q8WXX5 260 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SLC7A6OSQ96CW6 309 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 P2RY11Q96G91 374 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 CELF6Q96J87 481 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ZFP42Q96MM3 310 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 CADM1Q9BY67 442 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 UNKQ9C0B0 810 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 DCLRE1BQ9H816 532 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 CPA4Q9UI42 421 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 DNAJC25-GNG10A0A024R161 153 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 A0A0A0MRY4 1105 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 NEMP1O14524 444 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TXNDC9O14530 226 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 GSC2O15499 205 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 LUC7L3O95232 432 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 MOCS2O96007 188 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SERPINB6P35237 376 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 PTDSS1P48651 473 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 INCA1Q0VD86 236 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 CUL3Q13618 768 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ITGA9Q13797 1035 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SV2CQ496J9 727 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 KHDC1Q4VXA5 237 aaKnown RBP7.91□□□□□ -1.14
HDAC9-201ENST00000401921 PPM1JQ5JR12 505 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 RINLQ6ZS11 566 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 CMC1Q7Z7K0 106 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms