RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TAGLN3Q9UI15 199 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 NUDT5Q9UKK9 219 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 EFR3BQ9Y2G0 817 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 KIF13BQ9NQT8 1826 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 KIF1CO43896 1103 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 CACNB2Q08289 660 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 BLMHQ13867 455 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 SEPT6Q14141 434 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 CDCA2Q69YH5 1023 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 ULK2Q8IYT8 1036 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 PIDD1Q9HB75 910 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 PTPRHQ9HD43 1115 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 C20orf96Q9NUD7 363 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 ANGPTL2Q9UKU9 493 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 PLA2G4CQ9UP65 541 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 AK5Q9Y6K8 562 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 E7ESA3 106 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 EEF2KO00418 725 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 PHGDHO43175 533 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 BPGMP07738 259 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 SOX11P35716 441 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 TRIP10Q15642 601 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 LPCAT4Q643R3 524 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 PLPPR4Q7Z2D5 763 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 PIGZQ86VD9 579 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 TMPRSS6Q8IU80 811 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 CCNJLQ8IV13 435 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 APPL2Q8NEU8 664 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 OR6J1Q8NGC5 347 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 DNAJB3Q8WWF6 145 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 P2RY11Q96G91 374 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 AGAP2Q99490 1192 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 TMEM216Q9P0N5 145 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 GAS2O43903 313 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 CTSHP09668 335 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 RALBP11234 206 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 ETV4P43268 484 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 CACNA2D1P54289 1103 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 AP2B1P63010 937 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 HASPINQ8TF76 798 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 NRG4Q8WWG1 115 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 SLC10A4Q96EP9 437 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 CDCA5Q96FF9 252 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 FRMD8P1Q9BZ68 369 aaPredicted RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 HBS1LQ9Y450 684 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 QSER1Q2KHR3 1735 aa13.03□□□□□ -0.32
PPP4R1-202ENST00000400555 TSPAN1O60635 241 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 MOCS2O96007 188 aaPredicted RBP13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 GNAT1P11488 350 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 NCAM1P13591 858 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 TGM2P21980 687 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 POU5F1BQ06416 359 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 OLFML1Q6UWY5 402 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 PNPLA1Q8N8W4 532 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 MZB1Q8WU39 189 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 USP13Q92995 863 aaPredicted RBP13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 FAM136AQ96C01 138 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 SIGLEC10Q96LC7 697 aa13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 OXCT2Q9BYC2 517 aaPredicted RBP13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 WDR55Q9H6Y2 383 aaPredicted RBP13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 SPATS2LQ9NUQ6 558 aaKnown RBP13.02□□□□□ -0.32
PPP4R1-202ENST00000400555 DFFAO00273 331 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 SMNDC1O75940 238 aaKnown RBP eCLIP13.02□□□□□ -0.336e-7■■□□□ 13.7
PPP4R1-202ENST00000400555 JCHAINP01591 159 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 CYP2C9P11712 490 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 ENO3P13929 434 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 GNAZP19086 355 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 ATICP31939 592 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 L1CAMP32004 1257 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 CCR10P46092 362 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 GRM1Q13255 1194 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 CTC1Q2NKJ3 1217 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 IARS2Q9NSE4 1012 aaKnown RBP13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 BFARQ9NZS9 450 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 ITGA11Q9UKX5 1188 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 PFKMP08237 780 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 PTPN7P35236 360 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 ITKQ08881 620 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 FBXO47Q5MNV8 452 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 CERCAMQ5T4B2 595 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 ADGRF2Q8IZF7 708 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 SKA1Q96BD8 255 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 MFSD3Q96ES6 412 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 ZFP42Q96MM3 310 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 GCOM2Q9BZD3 368 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 TASP1Q9H6P5 420 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 DDIT4Q9NX09 232 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 KCNK4Q9NYG8 393 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC7A8Q9UHI5 535 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 TLK1Q9UKI8 766 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 PPM1HQ9ULR3 514 aa13.02□□□□□ -0.33
PPP4R1-202ENST00000400555 TRPA1O75762 1119 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 GARSP41250 739 aaKnown RBP13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC18A2Q05940 514 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 STILQ15468 1287 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms