RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 IL27RAQ6UWB1 636 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 DBX2Q6ZNG2 339 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 CHST9Q7L1S5 443 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ADIPOR2Q86V24 386 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 SMYD4Q8IYR2 804 aaPredicted RBP12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ARHGAP18Q8N392 663 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ANKRD52Q8NB46 1076 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 RHBDD1Q8TEB9 315 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 HNRNPLLQ8WVV9 542 aaKnown RBP12.45□□□□□ -0.42
LINC00544-201ENST00000400540 SLC2A11Q9BYW1 496 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 UBXN6Q9BZV1 441 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ABCB8Q9NUT2 735 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 KIAA1522Q9P206 1035 aaPredicted RBP12.45□□□□□ -0.42
LINC00544-201ENST00000400540 TSPAN16Q9UKR8 245 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00544-201ENST00000400540 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.45□□□□□ -0.42
LINC00544-201ENST00000400540 SHROOM3Q8TF72 1996 aa12.45□□□□□ -0.42
LINC00544-201ENST00000400540 FAM149AA5PLN7 773 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 YJEFN3A6XGL0 299 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 E7ENQ6 273 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 FLRT2O43155 660 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 DKK1O94907 266 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 MYL1P05976 194 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 SYKP43405 635 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 AFF3P51826 1226 aaKnown RBP12.44□□□□□ -0.42
LINC00544-201ENST00000400540 RPS14P62263 151 aaKnown RBP12.44□□□□□ -0.42
LINC00544-201ENST00000400540 IL9RQ01113 521 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 ENPEPQ07075 957 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 CBWD6Q4V339 395 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 MPPE1Q53F39 396 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 SOWAHCQ53LP3 525 aaPredicted RBP12.44□□□□□ -0.42
LINC00544-201ENST00000400540 CBWD3Q5JTY5 395 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 CBWD5Q5RIA9 395 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 TMPRSS7Q7RTY8 843 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 GUF1Q8N442 669 aaKnown RBP12.44□□□□□ -0.42
LINC00544-201ENST00000400540 FBXL13Q8NEE6 735 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 BIRC7Q96CA5 298 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 DNAI2Q9GZS0 605 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 MTG2Q9H4K7 406 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 TM9SF3Q9HD45 589 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 RAB20Q9NX57 234 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 USP25Q9UHP3 1055 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 GGA2Q9UJY4 613 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 PCDHGB2Q9Y5G2 931 aa12.44□□□□□ -0.42
LINC00544-201ENST00000400540 XPO1O14980 1071 aaKnown RBP12.43□□□□□ -0.42
LINC00544-201ENST00000400540 TIMM44O43615 452 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 FSBPO95073 299 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 SEMA4FO95754 770 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 HSP90AA1P07900 732 aaKnown RBP12.43□□□□□ -0.42
LINC00544-201ENST00000400540 RPL13P26373 211 aaKnown RBP12.43□□□□□ -0.42
LINC00544-201ENST00000400540 GTF2H1P32780 548 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 CD70P32970 193 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 HARS2P49590 506 aaKnown RBP12.43□□□□□ -0.42
LINC00544-201ENST00000400540 BCAT1P54687 386 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 BSPRYQ5W0U4 402 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 MBLAC2Q68D91 279 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 RFWD3Q6PCD5 774 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 KIAA0907Q7Z7F0 614 aaPredicted RBP12.43□□□□□ -0.42
LINC00544-201ENST00000400540 HSCBQ8IWL3 235 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00544-201ENST00000400540 UBA3Q8TBC4 463 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 WFIKKN2Q8TEU8 576 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 BBC3Q96PG8 261 aaPredicted RBP12.43□□□□□ -0.42
LINC00544-201ENST00000400540 ORAI3Q9BRQ5 295 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 PCED1AQ9H1Q7 454 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 GOLPH3LQ9H4A5 285 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 PRSS16Q9NQE7 514 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 STOML2Q9UJZ1 356 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 ANKRD6Q9Y2G4 727 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 KALRNO60229 2985 aa12.43□□□□□ -0.42
LINC00544-201ENST00000400540 FAM237AA0A1B0GTK4 181 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 GOLGA6L7A0A1B0GV03 622 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 H0Y8X5 98 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 PIK3R2O00459 728 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 TBL1XO60907 577 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 GABBR2O75899 941 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 C7P10643 843 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 PABPC1P11940 636 aaKnown RBP12.42□□□□□ -0.42
LINC00544-201ENST00000400540 LCP1P13796 627 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 CD19P15391 556 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 SLC6A4P31645 630 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 GRIA4P48058 902 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 SLC8A3P57103 927 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 MCCD1P59942 119 aaPredicted RBP12.42□□□□□ -0.42
LINC00544-201ENST00000400540 BST2Q10589 180 aaKnown RBP12.42□□□□□ -0.42
LINC00544-201ENST00000400540 E2F5Q15329 346 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 CCDC157Q569K6 752 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 DCAF17Q5H9S7 520 aaPredicted RBP12.42□□□□□ -0.42
LINC00544-201ENST00000400540 ADGRF1Q5T601 910 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 AHI1Q8N157 1196 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 TTC39CQ8N584 583 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 RNF139Q8WU17 664 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 CCDC47Q96A33 483 aaKnown RBP12.42□□□□□ -0.42
LINC00544-201ENST00000400540 TMA16Q96EY4 203 aaKnown RBP12.42□□□□□ -0.42
LINC00544-201ENST00000400540 MYEOVQ96EZ4 313 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 CRELD1Q96HD1 420 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 SPATA32Q96LK8 384 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 IPO9Q96P70 1041 aaKnown RBP12.42□□□□□ -0.42
LINC00544-201ENST00000400540 CDC6Q99741 560 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 BTBD1Q9H0C5 482 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms