RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 C11orf49Q9H6J7 331 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 RMI1Q9H9A7 625 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 BRF2Q9HAW0 419 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 TMEM8AQ9HCN3 771 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 ERVK-5Q9HDB9 667 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 PDE7BQ9NP56 450 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 XPNPEP3Q9NQH7 507 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 PXMP2Q9NR77 195 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 INTS10Q9NVR2 710 aaKnown RBP5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 C5AR2Q9P296 337 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 SEC63Q9UGP8 760 aaKnown RBP5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 NAGPAQ9UK23 515 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 SMG5Q9UPR3 1016 aaKnown RBP5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 DYRK1BQ9Y463 629 aa5.68□□□□□ -1.5
HMGB3P7-201ENST00000400214 EVPLQ92817 2033 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ESYT2A0FGR8 921 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 CCDC78A2IDD5 438 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 KBTBD13C9JR72 458 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 GCOM1H8Y6P7 765 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 NKRFO15226 690 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 TMPRSS2O15393 492 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 SART1O43290 800 aaKnown RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 THAP12O43422 761 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ADAM20O43506 726 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 BNIP3LO60238 219 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 LRRN2O75325 713 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ACTL6BO94805 426 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 POLR2MP0CAP2 368 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 SFTPCP11686 197 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 TYRP14679 529 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 TFEBP19484 476 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 HLA-DPA1P20036 260 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 MAPK3P27361 379 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 GABRB3P28472 473 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 EIF2DP41214 584 aaKnown RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 SSR1P43307 286 aaKnown RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ZNF41P51814 821 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 NLRP12P59046 1061 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 EPS8Q12929 822 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 GAS6Q14393 721 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 NFE2L1Q14494 772 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 NAA25Q14CX7 972 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 PGM5Q15124 567 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ANKRD1Q15327 319 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 NR0B2Q15466 257 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 STXBP2Q15833 593 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 PKN1Q16512 942 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 PCSK7Q16549 785 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 PFKFB3Q16875 520 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ATPAF1Q5TC12 328 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 KCNV1Q6PIU1 500 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ELMSAN1Q6PJG2 1045 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 CRTC3Q6UUV7 619 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 SLC39A5Q6ZMH5 540 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 USP49Q70CQ1 688 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 OTUD6AQ7L8S5 288 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 GPR149Q86SP6 731 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 FBXO16Q8IX29 292 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 DIS3L2Q8IYB7 885 aaKnown RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ADSSL1Q8N142 457 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 SCML4Q8N228 414 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 DTWD2Q8NBA8 298 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 PCSK9Q8NBP7 692 aaKnown RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 RNF214Q8ND24 703 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 IL17RDQ8NFM7 739 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 SCFD2Q8WU76 684 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 RAB24Q969Q5 203 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 CHAMP1Q96JM3 812 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 DACH2Q96NX9 599 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 FCRL3Q96P31 734 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ALPK1Q96QP1 1244 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 REEP2Q9BRK0 252 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 EIF2AQ9BY44 585 aaKnown RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 RNF26Q9BY78 433 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 WDR11Q9BZH6 1224 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 UPF3BQ9BZI7 483 aaKnown RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 GLT8D2Q9H1C3 349 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 PSTPIP2Q9H939 334 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ERVMER34-1Q9H9K5 563 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 NECTIN3Q9NQS3 549 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 PDGFCQ9NRA1 345 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 PNPOQ9NVS9 261 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 BARHL2Q9NY43 387 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 RGL1Q9NZL6 768 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 LPAR3Q9UBY5 353 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 PCDHA6Q9UN73 950 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 CAMK2AQ9UQM7 478 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 NAALADL1Q9UQQ1 740 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 HS3ST4Q9Y661 456 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 DDX49Q9Y6V7 483 aaKnown RBP5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 MYO9BQ13459 2157 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 ELP1O95163 1332 aa5.67□□□□□ -1.5
HMGB3P7-201ENST00000400214 LAMA2P24043 3122 aaKnown RBP5.66□□□□□ -1.5
HMGB3P7-201ENST00000400214 LOXHD1Q8IVV2 1947 aa5.66□□□□□ -1.5
HMGB3P7-201ENST00000400214 KRT87PA6NCN2 255 aa5.66□□□□□ -1.5
HMGB3P7-201ENST00000400214 CLCA1A8K7I4 914 aa5.66□□□□□ -1.5
HMGB3P7-201ENST00000400214 AKR1B15C9JRZ8 316 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P7-201ENST00000400214 TXNL1O43396 289 aa5.66□□□□□ -1.5
HMGB3P7-201ENST00000400214 PFKFB2O60825 505 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms