RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 H3BNC9 293 aa6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 GTPBP1O00178 669 aaKnown RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 EPHX1P07099 455 aa6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 PRR35P0CG20 571 aa6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 GRNP28799 593 aaKnown RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 DHPSP49366 369 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZC2HC1CQ53FD0 456 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 INTS6LQ5JSJ4 861 aaKnown RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 DRICH1Q6PGQ1 229 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 SLC2A13Q96QE2 648 aa6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 IFIH1Q9BYX4 1025 aaKnown RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 CCSER1Q9C0I3 900 aa6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 OPA3Q9H6K4 179 aa6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 EIF2B3Q9NR50 452 aaKnown RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 PANK4Q9NVE7 773 aa6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 ETAA1Q9NY74 926 aa6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 SUCLA2Q9P2R7 463 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 USP15Q9Y4E8 981 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC13-202ENST00000399438 CAPN14A8MX76 684 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM86B1E9PN63 330 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 MAPK13O15264 365 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ECE2O60344 883 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 HTR3BO95264 441 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM86B2P0C5J1 330 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 KCNA5P22460 613 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 TBXAS1P24557 533 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ABCD3P28288 659 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 CASP4P49662 377 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 MECP2P51608 486 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 AP3M2P53677 418 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 MRPS5P82675 430 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 GABPB1Q06547 395 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 CETN1Q12798 172 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 DAG1Q14118 895 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 SUZ12Q15022 739 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 TBCCQ15814 346 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 CAPRIN2Q6IMN6 1127 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 LRIG3Q6UXM1 1119 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 DDX53Q86TM3 631 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM9CQ8IZT9 166 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 SCML4Q8N228 414 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 DPP10Q8N608 796 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 EFHBQ8N7U6 833 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 TTLL6Q8N841 843 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 FIBINQ8TAL6 211 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 TBC1D22AQ8WUA7 517 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 METTL21AQ8WXB1 218 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 RAD54LQ92698 747 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 MTMR9Q96QG7 549 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 HEPHQ9BQS7 1158 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ANO3Q9BYT9 981 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 RNPEPQ9H4A4 650 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 SMARCAD1Q9H4L7 1026 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZNF287Q9HBT7 754 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 TMPRSS11EQ9UL52 423 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ARFGEF1Q9Y6D6 1849 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM169AQ9Y6X4 670 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ATP8B3O60423 1300 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 PDS5AQ29RF7 1337 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 F5H6K3 240 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 PEX10O60683 326 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 NDUFB10O96000 172 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 HLA-DOAP06340 250 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 PLA2G4BP0C869 781 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 SLC9A1P19634 815 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ADRA1BP35368 520 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 KLRC3Q07444 240 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 SPAG1Q07617 926 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 PUM1Q14671 1186 aaKnown RBP eCLIP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 XKR9Q5GH70 373 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 SH2D4BQ5SQS7 431 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 TTC7BQ86TV6 843 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 SFR1Q86XK3 245 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 CCNJLQ8IV13 435 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRIM59Q8IWR1 403 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ANKS4BQ8N8V4 417 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZBTB8BQ8NAP8 495 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 NLGN2Q8NFZ4 835 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 RAPGEF5Q92565 580 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 CUL5Q93034 780 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 MUL1Q969V5 352 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 KCTD15Q96SI1 283 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 UQCC2Q9BRT2 126 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 ERVK-5Q9HDB9 667 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM86C1Q9NVL1 165 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 PIM2Q9P1W9 311 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 CAMK2AQ9UQM7 478 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 HRH3Q9Y5N1 445 aa6.45□□□□□ -1.38
TRAPPC13-202ENST00000399438 LAMA3Q16787 3333 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TGFBR3LH3BV60 316 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TAF4O00268 1085 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 NDUFS2O75306 463 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CALCAP01258 141 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 IL2RAP01589 272 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 SELPP16109 830 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TGM1P22735 817 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 VPS41P49754 854 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 PLTPP55058 493 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 GABPAQ06546 454 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms