RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 DNAJB2P25686 324 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CXCR3P49682 368 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 NDUFV1P49821 464 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TUSC3Q13454 348 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FRG1Q14331 258 aaKnown RBP18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ZKSCAN8Q15776 578 aaPredicted RBP18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SYPL2Q5VXT5 272 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CGB2Q6NT52 195 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 DCLRE1AQ6PJP8 1040 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 UNC5AQ6ZN44 842 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ZNF534Q76KX8 674 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CTAGE3PQ8IX95 158 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PPM1NQ8N819 430 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SMC1BQ8NDV3 1235 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SLC7A14Q8TBB6 771 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 RAB3IL1Q8TBN0 382 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ACMSDQ8TDX5 336 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TRIB2Q92519 343 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 STAMBPL1Q96FJ0 436 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 P2RY11Q96G91 374 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 EPAS1Q99814 870 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 IQCGQ9H095 443 aaKnown RBP18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MANSC1Q9H8J5 431 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 WDR6Q9NNW5 1121 aaKnown RBP18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PIGVQ9NUD9 493 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MIOSQ9NXC5 875 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TSC2P49815 1807 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 HHLA1C9JL84 531 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 RNF103O00237 685 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 HNRNPCL1O60812 293 aaKnown RBP18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CCNFP41002 786 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ETV4P43268 484 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SCNN1GP51170 649 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 RIPK1Q13546 671 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TIGD5Q53EQ6 642 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PYROXD2Q8N2H3 581 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 AGGF1Q8N302 714 aaeCLIP18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ZNF276Q8N554 614 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ZMIZ2Q8NF64 920 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MAGEC3Q8TD91 643 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TUBB6Q9BUF5 446 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 COLEC11Q9BWP8 271 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 DMAP1Q9NPF5 467 aaPredicted RBP18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 XPNPEP3Q9NQH7 507 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TXLNGQ9NUQ3 528 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ABCF3Q9NUQ8 709 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MAD1L1Q9Y6D9 718 aa18.25■□□□□ 0.51
HLA-DQB1-204ENST00000399084 YJEFN3A6XGL0 299 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 E7ENQ6 273 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 COPEO14579 308 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 NRP1O14786 923 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PSMD3O43242 534 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MFSD11O43934 449 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 UBOX5O94941 541 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PGK1P00558 417 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 NCAM1P13591 858 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 THPOP40225 353 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TPI1P60174 286 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 IFRD2Q12894 506 aaPredicted RBP18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 NME3Q13232 169 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 LRRC37BQ96QE4 947 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 OSBPL2Q9H1P3 480 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PRDM12Q9H4Q4 367 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 WDCPQ9H6R7 721 aa18.24■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MAGEB16A2A368 324 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 C2CD2LO14523 706 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CREB3O43889 395 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ASGR1P07306 291 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CCNB1P14635 433 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 VAV1P15498 845 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PGAM1P18669 254 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ADRA1DP25100 572 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FLT3LGP49771 235 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 RASSF2P50749 326 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 COG7P83436 770 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PPIDQ08752 370 aaKnown RBP18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 AP1B1Q10567 949 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FAXCQ5TGI0 409 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FBXW10Q5XX13 1052 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CCSAPQ6IQ19 270 aaPredicted RBP18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MARK2Q7KZI7 788 aaKnown RBP18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CCNYQ8ND76 341 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 HDAC11Q96DB2 347 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PPP1R2P1Q96PQ5 205 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 LGMNQ99538 433 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 AGO3Q9H9G7 860 aaKnown RBP18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 NMRK2Q9NPI5 230 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 GRID1Q9ULK0 1009 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MEIS3P2A8K0S8 358 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TRIM49D1C9J1S8 452 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 B3GAT3O94766 335 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 EOMESO95936 686 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CTSHP09668 335 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ERCC2P18074 760 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CTGFP29279 349 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TSPY1Q01534 308 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CDK18Q07002 472 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SPRED3Q2MJR0 410 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ITPRIPL1Q6GPH6 555 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms