RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 KPNA7A9QM74 516 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 XPOTO43592 962 aaKnown RBP11.73□□□□□ -0.53
C4orf3-201ENST00000399075 ENTPD5O75356 428 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 DAB1O75553 588 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 RECQL4O94761 1208 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 KCNE1P15382 129 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 SMPD1P17405 629 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 ADORA2BP29275 332 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 GLUD2P49448 558 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 WASHC5Q12768 1159 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 R3HDM1Q15032 1099 aaKnown RBP11.73□□□□□ -0.53
C4orf3-201ENST00000399075 XKR4Q5GH76 650 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 USP50Q70EL3 339 aaPredicted RBP11.73□□□□□ -0.53
C4orf3-201ENST00000399075 PRR11Q96HE9 360 aaPredicted RBP11.73□□□□□ -0.53
C4orf3-201ENST00000399075 NAF1Q96HR8 494 aaKnown RBP11.73□□□□□ -0.53
C4orf3-201ENST00000399075 FERMT1Q9BQL6 677 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 SNX25Q9H3E2 840 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.73□□□□□ -0.53
C4orf3-201ENST00000399075 STOML1Q9UBI4 398 aa11.73□□□□□ -0.53
C4orf3-201ENST00000399075 HBS1LQ9Y450 684 aaKnown RBP11.73□□□□□ -0.53
C4orf3-201ENST00000399075 ZNF236Q9UL36 1845 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 LCP1P13796 627 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 DARSP14868 501 aaKnown RBP11.72□□□□□ -0.53
C4orf3-201ENST00000399075 GOT1P17174 413 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 PGAM1P18669 254 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 AMPD1P23109 780 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 HSF5Q4G112 596 aaPredicted RBP11.72□□□□□ -0.53
C4orf3-201ENST00000399075 MROH9Q5TGP6 573 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 CES4AQ5XG92 561 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 RFWD3Q6PCD5 774 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 DENND5BQ6ZUT9 1274 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 TTC7BQ86TV6 843 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 TEX9Q8N6V9 391 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 CDKL2Q92772 493 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 NT5C3BQ969T7 300 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 MCUR1Q96AQ8 359 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 TNIP3Q96KP6 325 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 STN1Q9H668 368 aaKnown RBP11.72□□□□□ -0.53
C4orf3-201ENST00000399075 ARHGEF4Q9NR80 690 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 THAP1Q9NVV9 213 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 CHCHD3Q9NX63 227 aaKnown RBP11.72□□□□□ -0.53
C4orf3-201ENST00000399075 SORCS3Q9UPU3 1222 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 SMIM35A0A1B0GVV1 85 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 H3BRJ5 948 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 MAGEC1O60732 1142 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 GRIA1P42261 906 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 RAP1GDS1P52306 607 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 THEMIS2Q5TEJ8 643 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 ARID3BQ8IVW6 561 aaPredicted RBP11.72□□□□□ -0.53
C4orf3-201ENST00000399075 ADGRF2Q8IZF7 708 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 SMC1BQ8NDV3 1235 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 OR6J1Q8NGC5 347 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 KCNV2Q8TDN2 545 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 LRRN4Q8WUT4 740 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 LPIN3Q9BQK8 851 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 NXF3Q9H4D5 531 aaKnown RBP11.72□□□□□ -0.53
C4orf3-201ENST00000399075 SETD4Q9NVD3 440 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 GJD2Q9UKL4 321 aa11.72□□□□□ -0.53
C4orf3-201ENST00000399075 MBLAC1A4D2B0 266 aaPredicted RBP11.71□□□□□ -0.53
C4orf3-201ENST00000399075 GLRA3O75311 464 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 PTDSS1P48651 473 aaKnown RBP11.71□□□□□ -0.53
C4orf3-201ENST00000399075 TAF6P49848 677 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 STX3Q13277 289 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 PDK1Q15118 436 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 SV2CQ496J9 727 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 GLRA4Q5JXX5 417 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 FAM182AQ5T1J6 154 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 IQSEC1Q6DN90 963 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 DSTYKQ6XUX3 929 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 ALYREFQ86V81 257 aaKnown RBP11.71□□□□□ -0.53
C4orf3-201ENST00000399075 COLGALT1Q8NBJ5 622 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 APPL2Q8NEU8 664 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 SLC2A14Q8TDB8 520 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 HNRNPABQ99729 332 aaKnown RBP11.71□□□□□ -0.53
C4orf3-201ENST00000399075 TRIM56Q9BRZ2 755 aaKnown RBP11.71□□□□□ -0.53
C4orf3-201ENST00000399075 ZCWPW1Q9H0M4 648 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 NRCAMQ92823 1304 aa11.71□□□□□ -0.53
C4orf3-201ENST00000399075 SMIM28A0A1B0GU29 152 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 WDR27A2RRH5 827 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 RNF103O00237 685 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 CYB561D2O14569 222 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 SPTLC1O15269 473 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 HCRTO43612 131 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 MFSD11O43934 449 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 PDGFRBP09619 1106 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 ACADSP16219 412 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 ATP6V1C1P21283 382 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 WARSP23381 471 aaKnown RBP11.71□□□□□ -0.54
C4orf3-201ENST00000399075 LMO2P25791 158 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 SULT1E1P49888 294 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 BLMHQ13867 455 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 PAFAH1B3Q15102 231 aaKnown RBP11.71□□□□□ -0.54
C4orf3-201ENST00000399075 KHDC1Q4VXA5 237 aaKnown RBP11.71□□□□□ -0.54
C4orf3-201ENST00000399075 OTUD1Q5VV17 481 aaPredicted RBP11.71□□□□□ -0.54
C4orf3-201ENST00000399075 PACS1Q6VY07 963 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 TMPRSS6Q8IU80 811 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 SPDL1Q96EA4 605 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 MAGEB5Q9BZ81 275 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 ABHD16BQ9H3Z7 469 aa11.71□□□□□ -0.54
C4orf3-201ENST00000399075 HES2Q9Y543 173 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms