RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 MFSD11O43934 449 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CSPG5O95196 566 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 JCHAINP01591 159 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ERVK-10P10266 1014 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PGAM1P18669 254 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 FDFT1P37268 417 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PSEN1P49768 467 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF132P52740 706 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GSCP56915 257 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CCDC142Q17RM4 750 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SLC10A6Q3KNW5 377 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PMF1Q6P1K2 205 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 LAYNQ6UX15 382 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PIGZQ86VD9 579 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 IPMKQ8NFU5 416 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 HASPINQ8TF76 798 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CATSPER2Q96P56 530 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SAR1AQ9NR31 198 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ADGRA2Q96PE1 1338 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CNTRLQ7Z7A1 2325 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 IQCA1LA6NCM1 817 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 HNRNPCL2B2RXH8 293 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PHGDHO43175 533 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TYROBPO43914 113 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 B4GALT4O60513 344 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 NFKB1P19838 968 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SOX11P35716 441 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CCR10P46092 362 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PTDSS1P48651 473 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 LPCAT4Q643R3 524 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CLNKQ7Z7G1 428 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TMPRSS6Q8IU80 811 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GPRC5AQ8NFJ5 357 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TXNRD2Q9NNW7 524 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 FNDC3AQ9Y2H6 1198 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 MAGEA13PA6NCF6 341 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SPDYE5A6NIY4 337 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 T-ENOLP0DO92 83 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ARF4P18085 180 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 LMO2P25791 158 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GJA8P48165 433 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 NDUFV1P49821 464 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TRIP10Q15642 601 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 KYAT1Q16773 422 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 DCAF4L1Q3SXM0 396 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PAN2Q504Q3 1202 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ADGRF2Q8IZF7 708 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 RNF148Q8N7C7 305 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TNIP3Q96KP6 325 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CHRAC1Q9NRG0 131 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PDHXO00330 501 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ENO3P13929 434 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SERPINB5P36952 375 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GHRHRQ02643 423 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SH3D19Q5HYK7 790 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 RABGAP1LQ5R372 815 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SLC27A1Q6PCB7 646 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 LCLAT1Q6UWP7 414 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ERO1BQ86YB8 467 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 LENG1Q96BZ8 264 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 MARK4Q96L34 752 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 WDR83Q9BRX9 315 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ATXN3LQ9H3M9 355 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PRDM12Q9H4Q4 367 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 WDR55Q9H6Y2 383 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GPRC5DQ9NZD1 345 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CPA4Q9UI42 421 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ZMYND8Q9ULU4 1186 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 IGKV6D-21A0A0A0MT36 114 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SDR42E2A6NKP2 422 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 RNF103O00237 685 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CTHP32929 405 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SPRP35270 261 aaPredicted RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 AP2B1P63010 937 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 PITX1P78337 314 aaPredicted RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CRYMQ14894 314 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 C4orf50Q6ZRC1 276 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SH3TC2Q8TF17 1288 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 UTP4Q969X6 686 aaKnown RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SLC7A6OSQ96CW6 309 aaPredicted RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 XYLT2Q9H1B5 865 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SPATS2LQ9NUQ6 558 aaKnown RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 DDX43Q9NXZ2 648 aaKnown RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 TAS2R1Q9NYW7 299 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 LAMA3Q16787 3333 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 ARID1AO14497 2285 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 C10orf71Q711Q0 1435 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 TCRBV5S1A1TA0A578 114 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 H3BRB1 525 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 MT-CO1P00395 513 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 PDK1Q15118 436 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 DLG2Q15700 870 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 PCSK7Q16549 785 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 GEN1Q17RS7 908 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 FSCBQ5H9T9 825 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 RALGPS1Q5JS13 557 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 C10orf107Q8IVU9 208 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SCN4BQ8IWT1 228 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 TUT1Q9H6E5 874 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms