RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TMEM120AQ9BXJ8 343 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ARHGEF4Q9NR80 690 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PCMTD2Q9NV79 361 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 FZD10Q9ULW2 581 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 IPPQ9Y573 584 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CREB3O43889 395 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SERPINB3P29508 390 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 BEX3Q00994 111 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 EFHC1Q5JVL4 640 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 OSBPL1AQ9BXW6 950 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZNF395Q9H8N7 513 aaPredicted RBP18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 FLRT1Q9NZU1 646 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PLLPQ9Y342 182 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CCDC195A0A1B0GUA6 201 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 WDR27A2RRH5 827 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 DLDP09622 509 aaKnown RBP18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 AP1B1Q10567 949 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 NME3Q13232 169 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SEMA5AQ13591 1074 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 FAM110CQ1W6H9 321 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SLC25A52Q3SY17 297 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 LGSNQ5TDP6 509 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 OTUD1Q5VV17 481 aaPredicted RBP18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SYPL2Q5VXT5 272 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 BSPRYQ5W0U4 402 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ARCQ7LC44 396 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 LONP2Q86WA8 852 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TP53INP2Q8IXH6 220 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PDCD7Q8N8D1 485 aaKnown RBP18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 INPP5DQ92835 1189 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 OXNAD1Q96HP4 312 aaPredicted RBP18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 OLFM3Q96PB7 478 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 GTF2IRD1Q9UHL9 959 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CPA4Q9UI42 421 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PDCD11Q14690 1871 aaKnown RBP18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 XPO1O14980 1071 aaKnown RBP18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 DGKIO75912 1065 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CCND1P24385 295 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PARP6Q2NL67 630 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SV2CQ496J9 727 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SMG8Q8ND04 991 aaKnown RBP18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 DEPDC1BQ8WUY9 529 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TNIP3Q96KP6 325 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SEPT10Q9P0V9 454 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PCDHA11Q9Y5I1 949 aa18.91■□□□□ 0.62
CHRFAM7A-202ENST00000397827 FAM237BA0A1B0GVD1 139 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 GLTPD2A6NH11 291 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 FAM159BA6NKW6 160 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 KRT38O76015 456 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 KCNE1P15382 129 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SCNN1AP37088 669 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PNPLA4P41247 253 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ADAM17P78536 824 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CES4AQ5XG92 561 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 WSCD1Q658N2 575 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 C4orf22Q6V702 233 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 HFE2Q6ZVN8 426 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 COLGALT1Q8NBJ5 622 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 DUSP16Q9BY84 665 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 A0A0A0MRY4 1105 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 M0QYT0 321 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MYL3P08590 195 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MYL2P10916 166 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 AXLP30530 894 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SESN2P58004 480 aaPredicted RBP18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PAQR9Q6ZVX9 377 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 NDUFAF2Q8N183 169 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CCNYQ8ND76 341 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 FAM13CQ8NE31 585 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SPATA13Q96N96 652 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PARK7Q99497 189 aaKnown RBP18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 XAB2Q9HCS7 855 aaKnown RBP18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 BRCA2P51587 3418 aa18.9■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MEIS3P2A8K0S8 358 aa18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 XPOTO43592 962 aaKnown RBP18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PSEN2P49810 448 aa18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZBTB16Q05516 673 aa18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PCBP1Q15365 356 aaKnown RBP eCLIP18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TWF2Q6IBS0 349 aaKnown RBP18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ADAM32Q8TC27 787 aa18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 RNF139Q8WU17 664 aa18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 P2RY11Q96G91 374 aa18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ARL8BQ9NVJ2 186 aa18.89■□□□□ 0.62
CHRFAM7A-202ENST00000397827 A0A1B0GVG6 124 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 DPPA5A6NC42 116 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 RASSF2P50749 326 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MAP3K7CLP57077 242 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 IRX4P78413 519 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TMPRSS15P98073 1019 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 BST1Q10588 318 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 CCL14Q16627 93 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 XKR4Q5GH76 650 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 KIAA0319Q5VV43 1072 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TTC7BQ86TV6 843 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 NME8Q8N427 588 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PGLYRP2Q96PD5 576 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 HNRNPABQ99729 332 aaKnown RBP18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 IL1RAPL1Q9NZN1 696 aa18.89■□□□□ 0.61
CHRFAM7A-202ENST00000397827 RNF103O00237 685 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms