RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ACBD5Q5T8D3 534 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 GAREM2Q75VX8 874 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 MIB1Q86YT6 1006 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 JAMLQ86YT9 394 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 ATL2Q8NHH9 583 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 ANKRD7Q92527 254 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 EPAS1Q99814 870 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 SLC28A3Q9HAS3 691 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 RASAL2Q9UJF2 1139 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 DNPEPQ9ULA0 475 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 NEU2Q9Y3R4 380 aa20.15■□□□□ 0.82
PDLIM2-205ENST00000397761 SLC12A8A0AV02 714 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 DCLK1O15075 740 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 LRIG2O94898 1065 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 CSPG5O95196 566 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 APOEP02649 317 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 ITGAVP06756 1048 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 EPCAMP16422 314 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 AMPD1P23109 780 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 TNFRSF8P28908 595 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 NR2C2P49116 596 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 MLLT6P55198 1093 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 SLC7A5Q01650 507 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 NCBP2-AS2Q69YL0 99 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 CCDC105Q8IYK2 499 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 ELMOD1Q8N336 334 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 GRK7Q8WTQ7 553 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 BTN2A3PQ96KV6 586 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 CERS4Q9HA82 394 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 GDF3Q9NR23 364 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 SAE1Q9UBE0 346 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 DPP7Q9UHL4 492 aa20.14■□□□□ 0.81
PDLIM2-205ENST00000397761 C2orf78A6NCI8 922 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 EPOPA6NHQ4 379 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 CREB3O43889 395 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 H2AFXP16104 143 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 MCM3P25205 808 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 TPI1P60174 286 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 LMNB2Q03252 620 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 SNX1Q13596 522 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 PAFAH1B3Q15102 231 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 NUGGCQ68CJ6 796 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 SYDE1Q6ZW31 735 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 ZNF683Q8IZ20 524 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 ATP6V0D2Q8N8Y2 350 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 ARNTL2Q8WYA1 636 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 P3H4Q92791 437 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 FAM118BQ9BPY3 351 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 RNF38Q9H0F5 515 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 ETNK2Q9NVF9 386 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 HS3ST4Q9Y661 456 aa20.13■□□□□ 0.81
PDLIM2-205ENST00000397761 ECEL1O95672 775 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 PFKLP17858 780 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 VSNL1P62760 191 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 COG7P83436 770 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 SMAD3P84022 425 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 DUSP6Q16828 381 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 PIK3R6Q5UE93 754 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 NPNTQ6UXI9 565 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 ADGRD2Q7Z7M1 963 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 HS6ST3Q8IZP7 471 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 AZIN2Q96A70 460 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 PLD4Q96BZ4 506 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 HAUS1Q96CS2 278 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 ERP44Q9BS26 406 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 KLF16Q9BXK1 252 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 RAB17Q9H0T7 212 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 ZDHHC7Q9NXF8 308 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 XPO7Q9UIA9 1087 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 SNX10Q9Y5X0 201 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 HCFC2Q9Y5Z7 792 aa20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 NUP210Q8TEM1 1887 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-205ENST00000397761 ZSCAN5CA6NGD5 496 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 CCL16O15467 120 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 FGF19O95750 216 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 GAS8O95995 478 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 ERCC2P18074 760 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 GABRR2P28476 465 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 CDC25CP30307 473 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 DRG2P55039 364 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 SLC10A2Q12908 348 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 XRCC4Q13426 336 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 KCNC3Q14003 757 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 DUPD1Q68J44 220 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 UNC45BQ8IWX7 931 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 IFT20Q8IY31 132 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 ALLCQ8N6M5 410 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 EIF1ADQ8N9N8 165 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 GDPD5Q8WTR4 605 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 OLFM3Q96PB7 478 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 PRMT1Q99873 361 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 TRIM51Q9BSJ1 452 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 ASAH2Q9NR71 780 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 SLC12A6Q9UHW9 1150 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 NYNRINQ9P2P1 1898 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 CLUHO75153 1309 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 MYO18AQ92614 2054 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 IGLV3-10A0A075B6K4 115 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 MCF2LO15068 1137 aa20.11■□□□□ 0.81
PDLIM2-205ENST00000397761 FGF10O15520 208 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms