RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 AFMP43652 599 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 TEAD4Q15561 434 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 ZC3H3Q8IXZ2 948 aaKnown RBP16.84■□□□□ 0.29
CUX2-202ENST00000397643 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 TAS1R2Q8TE23 839 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 DDI1Q8WTU0 396 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 CYB5D2Q8WUJ1 264 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 CCDC34Q96HJ3 373 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 CYP3A43Q9HB55 503 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 MARCH2Q9P0N8 246 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.83■□□□□ 0.28
CUX2-202ENST00000397643 EIF4E1BA6NMX2 242 aaKnown RBP16.83■□□□□ 0.28
CUX2-202ENST00000397643 E9PAM4 449 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 PLXNA2O75051 1894 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 ZNF202O95125 648 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 PRB1P04280 392 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 SLFN14P0C7P3 912 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 CD58P19256 250 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 CD27P26842 260 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 RPS14P62263 151 aaKnown RBP16.83■□□□□ 0.28
CUX2-202ENST00000397643 IL9RQ01113 521 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 TRIP4Q15650 581 aaPredicted RBP16.83■□□□□ 0.28
CUX2-202ENST00000397643 CCDC157Q569K6 752 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 RAB41Q5JT25 222 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 BHLHA9Q7RTU4 235 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 KIAA0907Q7Z7F0 614 aaPredicted RBP16.83■□□□□ 0.28
CUX2-202ENST00000397643 ADIPOR2Q86V24 386 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 FMR1NBQ8N0W7 255 aaPredicted RBP16.83■□□□□ 0.28
CUX2-202ENST00000397643 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.83■□□□□ 0.28
CUX2-202ENST00000397643 UBL7Q96S82 380 aaPredicted RBP16.83■□□□□ 0.28
CUX2-202ENST00000397643 NIF3L1Q9GZT8 377 aa16.83■□□□□ 0.28
CUX2-202ENST00000397643 SLC12A8A0AV02 714 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 PLK4O00444 970 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 KIF20AO95235 890 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 IGHV4-34P06331 123 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 TRIM21P19474 475 aaKnown RBP16.82■□□□□ 0.28
CUX2-202ENST00000397643 ITPKBP27987 946 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 ABCG1P45844 678 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 CLDN6P56747 220 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 ZBTB16Q05516 673 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 PDE4CQ08493 712 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 PIGZQ86VD9 579 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 ENGASEQ8NFI3 743 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 PIP4K2CQ8TBX8 421 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 PLD4Q96BZ4 506 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 ARID3AQ99856 593 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 BTBD1Q9H0C5 482 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 PRSS16Q9NQE7 514 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 SERTAD1Q9UHV2 236 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 STOML2Q9UJZ1 356 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 STRIP2Q9ULQ0 834 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 ZNF462Q96JM2 2506 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 SHROOM3Q8TF72 1996 aa16.82■□□□□ 0.28
CUX2-202ENST00000397643 A0A1B0GTQ1 180 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 PDXKO00764 312 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 ACTN4O43707 911 aaKnown RBP16.81■□□□□ 0.28
CUX2-202ENST00000397643 FSBPO95073 299 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 MBD3O95983 291 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 TRIM49P0CI25 452 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 TRIM49CP0CI26 452 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 YWHAGP61981 247 aaKnown RBP eCLIP16.81■□□□□ 0.28
CUX2-202ENST00000397643 PPP3CAQ08209 521 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 FNDC3BQ53EP0 1204 aaKnown RBP16.81■□□□□ 0.28
CUX2-202ENST00000397643 KRBA2Q6ZNG9 492 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 CHST9Q7L1S5 443 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 TMPRSS12Q86WS5 348 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 ARHGAP18Q8N392 663 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 WFIKKN2Q8TEU8 576 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 COL26A1Q96A83 441 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 DCBLD2Q96PD2 775 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 FBRSQ9HAH7 460 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 FTSJ1Q9UET6 329 aa16.81■□□□□ 0.28
CUX2-202ENST00000397643 C10orf142B7Z368 130 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 CBX4O00257 560 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 TLX3O43711 291 aaPredicted RBP16.8■□□□□ 0.28
CUX2-202ENST00000397643 GCLMP48507 274 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 SGSHP51688 502 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 VAMP7P51809 220 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 ARID5AQ03989 594 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 SHBQ15464 509 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 MPPE1Q53F39 396 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 ZNF394Q53GI3 561 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 CEP135Q66GS9 1140 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 RSRC2Q7L4I2 434 aaKnown RBP16.8■□□□□ 0.28
CUX2-202ENST00000397643 WFDC5Q8TCV5 224 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 NDRG1Q92597 394 aaKnown RBP16.8■□□□□ 0.28
CUX2-202ENST00000397643 TIGD1Q96MW7 591 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 UBXN6Q9BZV1 441 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 IMPG2Q9BZV3 1241 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 PRORYQ9H606 182 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 SGK2Q9HBY8 427 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 ABCB8Q9NUT2 735 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 HOOK1Q9UJC3 728 aaKnown RBP16.8■□□□□ 0.28
CUX2-202ENST00000397643 GGA2Q9UJY4 613 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 PCDHGA1Q9Y5H4 931 aa16.8■□□□□ 0.28
CUX2-202ENST00000397643 VILLO15195 856 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 MAPK13O15264 365 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 ATXN7O15265 892 aaPredicted RBP16.79■□□□□ 0.28
CUX2-202ENST00000397643 WNT1P04628 370 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 PABPC1P11940 636 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms