RNA–Protein interactions for RNA: ENST00000397468.5

RFPL3-202, Transcript of ret finger protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-202ENST00000397468 CHST9Q7L1S5 443 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 ADAT2Q7Z6V5 191 aaKnown RBP10.12□□□□□ -0.79
RFPL3-202ENST00000397468 NAXDQ8IW45 347 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 AHI1Q8N157 1196 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 WFIKKN2Q8TEU8 576 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 SORCS1Q8WY21 1168 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 NDRG1Q92597 394 aaKnown RBP10.12□□□□□ -0.79
RFPL3-202ENST00000397468 ZNF419Q96HQ0 510 aaPredicted RBP10.12□□□□□ -0.79
RFPL3-202ENST00000397468 NT5C1BQ96P26 610 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 GSDMAQ96QA5 445 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 NUP58Q9BVL2 599 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 SLC2A11Q9BYW1 496 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 GTPBP4Q9BZE4 634 aaKnown RBP10.12□□□□□ -0.79
RFPL3-202ENST00000397468 ZDHHC5Q9C0B5 715 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 MKRN2Q9H000 416 aaKnown RBP10.12□□□□□ -0.79
RFPL3-202ENST00000397468 LHX5Q9H2C1 402 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 ABCC13Q9NSE7 274 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 WSB2Q9NYS7 404 aaPredicted RBP10.12□□□□□ -0.79
RFPL3-202ENST00000397468 FBXO10Q9UK96 956 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 ZDHHC9Q9Y397 364 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 HBS1LQ9Y450 684 aaKnown RBP10.12□□□□□ -0.79
RFPL3-202ENST00000397468 NEUROG3Q9Y4Z2 214 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 PCDHB4Q9Y5E5 795 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 NUMA1Q14980 2115 aa10.12□□□□□ -0.79
RFPL3-202ENST00000397468 CACNA1GO43497 2377 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 TRIM49BA6NDI0 452 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 UPK3BL1B0FP48 263 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 UPK3BL2E5RIL1 263 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 TULP2O00295 520 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 PIK3R2O00459 728 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 BCAT2O15382 392 aaPredicted RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 MSI1O43347 362 aaKnown RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 TIMM44O43615 452 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 SH3BP5O60239 455 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 DNTTP04053 509 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 HLA-EP13747 358 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 POLR2EP19388 210 aaKnown RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 MATKP42679 507 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 SLC11A2P49281 568 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 ST8SIA6P61647 398 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 LRRC63Q05C16 580 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 SLC14A1Q13336 389 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 BECN1Q14457 450 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 TRIP6Q15654 476 aaKnown RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 BSPRYQ5W0U4 402 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 KLHL10Q6JEL2 608 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 IL27RAQ6UWB1 636 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 METTL3Q86U44 580 aaKnown RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 UNC45BQ8IWX7 931 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 PPM1KQ8N3J5 372 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 OR2T3Q8NH03 318 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 CYB5D2Q8WUJ1 264 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 FAM149B1Q96BN6 582 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 TMA16Q96EY4 203 aaKnown RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 PIWIL1Q96J94 861 aaKnown RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 GAREM1Q9H706 876 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 METTL14Q9HCE5 456 aaKnown RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 CNGB3Q9NQW8 809 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 ITM2CQ9NQX7 267 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 ST7Q9NRC1 585 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 ABCB8Q9NUT2 735 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 DNAAF2Q9NVR5 837 aaKnown RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 USP36Q9P275 1121 aaKnown RBP10.11□□□□□ -0.79
RFPL3-202ENST00000397468 GGA2Q9UJY4 613 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 KLK13Q9UKR3 277 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 CEP83Q9Y592 693 aa10.11□□□□□ -0.79
RFPL3-202ENST00000397468 TMEM131Q92545 1883 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 TBL1XO60907 577 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 ATP5BP06576 529 aaKnown RBP10.1□□□□□ -0.79
RFPL3-202ENST00000397468 PABPC1P11940 636 aaKnown RBP10.1□□□□□ -0.79
RFPL3-202ENST00000397468 HOXD9P28356 352 aaPredicted RBP10.1□□□□□ -0.79
RFPL3-202ENST00000397468 TEAD4Q15561 434 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 TRIP4Q15650 581 aaPredicted RBP10.1□□□□□ -0.79
RFPL3-202ENST00000397468 NUGGCQ68CJ6 796 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 ANKRD40Q6AI12 368 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 PM20D1Q6GTS8 502 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 ISM2Q6H9L7 571 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 PIP4P1Q86T03 277 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 MFN1Q8IWA4 741 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 CHCHD4Q8N4Q1 142 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 ZNF366Q8N895 744 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 ZNF557Q8N988 423 aaPredicted RBP10.1□□□□□ -0.79
RFPL3-202ENST00000397468 CADM4Q8NFZ8 388 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 ERCC4Q92889 916 aaPredicted RBP10.1□□□□□ -0.79
RFPL3-202ENST00000397468 CAMK1GQ96NX5 476 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 DDX50Q9BQ39 737 aaKnown RBP10.1□□□□□ -0.79
RFPL3-202ENST00000397468 STIM2Q9P246 746 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 EIF2B4Q9UI10 523 aaKnown RBP10.1□□□□□ -0.79
RFPL3-202ENST00000397468 KIAA1257Q9ULG3 409 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 CLEC4EQ9ULY5 219 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 APOBEC2Q9Y235 224 aaKnown RBP10.1□□□□□ -0.79
RFPL3-202ENST00000397468 MSRB2Q9Y3D2 182 aa10.1□□□□□ -0.79
RFPL3-202ENST00000397468 KNL1Q8NG31 2342 aa10.09□□□□□ -0.79
RFPL3-202ENST00000397468 BICDL2A1A5D9 508 aa10.09□□□□□ -0.79
RFPL3-202ENST00000397468 FAM47DPA6NHR8 397 aa10.09□□□□□ -0.79
RFPL3-202ENST00000397468 GOLGA8CPA6NN73 597 aa10.09□□□□□ -0.79
RFPL3-202ENST00000397468 YJEFN3A6XGL0 299 aa10.09□□□□□ -0.79
RFPL3-202ENST00000397468 KCNJ18B7U540 433 aa10.09□□□□□ -0.79
RFPL3-202ENST00000397468 PPP1R3GB7ZBB8 358 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms