RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 DRC7Q8IY82 874 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 SYNPOQ8N3V7 929 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 ZNF653Q96CK0 615 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 PRICKLE1Q96MT3 831 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 SPATA6Q9NWH7 488 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 MUC6Q6W4X9 2439 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 ATG2BQ96BY7 2078 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 A0A087X0T9 212 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 GALR2O43603 387 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 RNF40O75150 1001 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 FAM228BP0C875 321 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 HOXD9P28356 352 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 EIF4A3P38919 411 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 GRIA2P42262 883 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 CXCR3P49682 368 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 MTAPQ13126 283 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 GAS6Q14393 721 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 CDO1Q16878 200 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 C15orf59Q2T9L4 293 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 CCDC14Q49A88 953 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 FBXO43Q4G163 708 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 BRMS1LQ5PSV4 323 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 PPP1R15BQ5SWA1 713 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 PIK3R6Q5UE93 754 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 BNIPLQ7Z465 357 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 TERB1Q8NA31 727 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 TMA16Q96EY4 203 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 TRIM11Q96F44 468 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 ISCUQ9H1K1 167 aa21.97■■□□□ 1.11
TSPAN4-206ENST00000397408 ANKRD62A6NC57 917 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 TACR2P21452 398 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 GPD1P21695 349 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 PTPN9P43378 593 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 DGKGP49619 791 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 SEC13P55735 322 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 PREPLQ4J6C6 727 aaPredicted RBP21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 MS4A13Q5J8X5 152 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 DCUN1D2Q6PH85 259 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 MYEOVQ96EZ4 313 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 IER2Q9BTL4 223 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 TKTL2Q9H0I9 626 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 WDCPQ9H6R7 721 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 PARVAQ9NVD7 372 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 CNOT8Q9UFF9 292 aaKnown RBP21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 PAXBP1Q9Y5B6 917 aa21.96■■□□□ 1.11
TSPAN4-206ENST00000397408 CACNA1IQ9P0X4 2223 aa21.95■■□□□ 1.11
TSPAN4-206ENST00000397408 WDFY4Q6ZS81 3184 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 TBC1D3BA6NDS4 549 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 K7EQS6 105 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 TBL1XO60907 577 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 ADCY5O95622 1261 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 RPL7AP62424 266 aaKnown RBP21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 MAMLD1Q13495 774 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 RAB6CQ53S08 254 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 SH3PXD2AQ5TCZ1 1133 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 PLEKHA7Q6IQ23 1121 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 PKN3Q6P5Z2 889 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 FAM131BQ86XD5 332 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 C1orf210Q8IVY1 113 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 LGI2Q8N0V4 545 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 HJURPQ8NCD3 748 aaPredicted RBP21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 IRX2Q9BZI1 471 aaPredicted RBP21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 RAB6CQ9H0N0 254 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 DEF6Q9H4E7 631 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 ANLNQ9NQW6 1124 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 TMEM51Q9NW97 253 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 ARHGEF38Q9NXL2 777 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 FBXO10Q9UK96 956 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 CLEC4EQ9ULY5 219 aa21.95■■□□□ 1.1
TSPAN4-206ENST00000397408 CACNA1HO95180 2353 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 SSU72P8A0A1W2PR75 194 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 TYW5A2RUC4 315 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 F5H5T6 163 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 PAGE1O75459 146 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 CISD3P0C7P0 127 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 MYBL1P10243 752 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 COL9A1P20849 921 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 GGCXP38435 758 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 RPS24P62847 133 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 MTA1Q13330 715 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 MAPK8IP2Q13387 824 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 C10orf76Q5T2E6 689 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 MPP7Q5T2T1 576 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 ALKBH5Q6P6C2 394 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 STRADAQ7RTN6 431 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 SPEM1Q8N4L4 309 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 PRSS33Q8NF86 280 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 FAM172AQ8WUF8 416 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 PRRX2Q99811 253 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 PRMT1Q99873 361 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 STIM2Q9P246 746 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 MYO1AQ9UBC5 1043 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 RAPGEFL1Q9UHV5 662 aa21.94■■□□□ 1.1
TSPAN4-206ENST00000397408 ANTXRLA6NF34 631 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 I6L893 689 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 CCP110O43303 1012 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 LAMTOR5O43504 91 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 ENDOD1O94919 500 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 ZNF143P52747 638 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 GFPT1Q06210 699 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms