RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 HMGXB4Q9UGU5 601 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 NUDT5Q9UKK9 219 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 PCDHA7Q9UN72 937 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 FRMD4BQ9Y2L6 1034 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 PCDHGB2Q9Y5G2 931 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 PLXND1Q9Y4D7 1925 aa9.19□□□□□ -0.94
CAPN3-208ENST00000397204 SMG1Q96Q15 3661 aaKnown RBP9.18□□□□□ -0.94
CAPN3-208ENST00000397204 MEI4A8MW99 385 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 KCNJ18B7U540 433 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 MDM4O15151 490 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 BCAT2O15382 392 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-208ENST00000397204 CAPN5O15484 640 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-208ENST00000397204 KLRC4O43908 158 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 CER1O95813 267 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 NR3C1P04150 777 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 CYBBP04839 570 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 ACADMP11310 421 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 MATKP42679 507 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 MFAP3P55082 362 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 ENPEPQ07075 957 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 GOLGA4Q13439 2230 aaKnown RBP9.18□□□□□ -0.94
CAPN3-208ENST00000397204 SUZ12Q15022 739 aaKnown RBP9.18□□□□□ -0.94
CAPN3-208ENST00000397204 EIF4HQ15056 248 aaKnown RBP9.18□□□□□ -0.94
CAPN3-208ENST00000397204 C1orf220Q5T0J3 134 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 SPOPLQ6IQ16 392 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 SLCO6A1Q86UG4 719 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 CPXM2Q8N436 756 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 TTC39CQ8N584 583 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 PNPLA1Q8N8W4 532 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 C1orf216Q8TAB5 229 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 GCN1Q92616 2671 aaKnown RBP9.18□□□□□ -0.94
CAPN3-208ENST00000397204 PRCCQ92733 491 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-208ENST00000397204 ERLEC1Q96DZ1 483 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 FAXDC2Q96IV6 333 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 OCSTAMPQ9BR26 566 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 HELZ2Q9BYK8 2649 aaKnown RBP9.18□□□□□ -0.94
CAPN3-208ENST00000397204 GAREM1Q9H706 876 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 CD93Q9NPY3 652 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 TM7SF3Q9NS93 570 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 EXOC1Q9NV70 894 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 RCOR1Q9UKL0 485 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 PCOLCE2Q9UKZ9 415 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 TRAF3IP3Q9Y228 551 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 GPSM3Q9Y4H4 160 aa9.18□□□□□ -0.94
CAPN3-208ENST00000397204 K7ELQ4 463 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 CILPO75339 1184 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 KIF20AO95235 890 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 MYL1P05976 194 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 PIK3CAP42336 1068 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 IL12RB1P42701 662 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 VAMP7P51809 220 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 MCCD1P59942 119 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 PTK2Q05397 1052 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 PDE4CQ08493 712 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 ZNF234Q14588 700 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 GEN1Q17RS7 908 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 HLA-BQ31612 363 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 DCAF12L1Q5VU92 463 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 CEP135Q66GS9 1140 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 INTS8Q75QN2 995 aaKnown RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 VASH1Q7L8A9 365 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 TMPRSS7Q7RTY8 843 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 ANKS1BQ7Z6G8 1248 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 ZCCHC9Q8N567 271 aaKnown RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 KIAA0895Q8NCT3 520 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 CCDC150Q8NCX0 1101 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 RHBDD1Q8TEB9 315 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 SETD7Q8WTS6 366 aaKnown RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 JAKMIP2Q96AA8 810 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 P2RY11Q96G91 374 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 PAGE5Q96GU1 130 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 HEXIM2Q96MH2 286 aaKnown RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 TWNKQ96RR1 684 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 MIR1-1HGQ9H1L0 117 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 DKK4Q9UBT3 224 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 USP25Q9UHP3 1055 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 SERTAD1Q9UHV2 236 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 EIF2B4Q9UI10 523 aaKnown RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 CFAP45Q9UL16 551 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 AGO1Q9UL18 857 aaKnown RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 STRIP2Q9ULQ0 834 aa9.17□□□□□ -0.94
CAPN3-208ENST00000397204 TNRC6BQ9UPQ9 1833 aaKnown RBP9.17□□□□□ -0.94
CAPN3-208ENST00000397204 PCDH15Q96QU1 1955 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 FLRT2O43155 660 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 CALUO43852 315 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-208ENST00000397204 DKK1O94907 266 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 EPHX1P07099 455 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 CORO1AP31146 461 aaKnown RBP9.16□□□□□ -0.94
CAPN3-208ENST00000397204 GTF2H1P32780 548 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 PSMC2P35998 433 aaKnown RBP9.16□□□□□ -0.94
CAPN3-208ENST00000397204 GCLMP48507 274 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 AFF3P51826 1226 aaKnown RBP9.16□□□□□ -0.94
CAPN3-208ENST00000397204 COPAP53621 1224 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 WDR4P57081 412 aaKnown RBP9.16□□□□□ -0.94
CAPN3-208ENST00000397204 SLC8A3P57103 927 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 BNC1Q01954 994 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 ARID5AQ03989 594 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 EFEMP1Q12805 493 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 NFIL3Q16649 462 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 MPPE1Q53F39 396 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms