RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TBX2Q13207 712 aaPredicted RBP15.13■□□□□ 0.01
SEC13-208ENST00000397109 USP39Q53GS9 565 aaKnown RBP15.13■□□□□ 0.01
SEC13-208ENST00000397109 FIGNQ5HY92 759 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 MPP7Q5T2T1 576 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 SYPL2Q5VXT5 272 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 ANKS1BQ7Z6G8 1248 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 TAC4Q86UU9 113 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 C11orf74Q86VG3 221 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 CHPFQ8IZ52 775 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 ZNF557Q8N988 423 aaPredicted RBP15.13■□□□□ 0.01
SEC13-208ENST00000397109 MSANTD4Q8NCY6 345 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 NEK11Q8NG66 645 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 FCRL2Q96LA5 508 aaPredicted RBP15.13■□□□□ 0.01
SEC13-208ENST00000397109 SPAG5Q96R06 1193 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 TJP2Q9UDY2 1190 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 SLC12A6Q9UHW9 1150 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 ZNF292O60281 2723 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 TYW5A2RUC4 315 aaKnown RBP15.12■□□□□ 0.01
SEC13-208ENST00000397109 LRP3O75074 770 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 TRUB2O95900 331 aaKnown RBP15.12■□□□□ 0.01
SEC13-208ENST00000397109 APOEP02649 317 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 TUBB4AP04350 444 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 SLC2A3P11169 496 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 SKILP12757 684 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 HOXD9P28356 352 aaPredicted RBP15.12■□□□□ 0.01
SEC13-208ENST00000397109 GBP1P32455 592 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 SOX5P35711 763 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 KLK7P49862 253 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 TERF1P54274 439 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 SLC6A3Q01959 620 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 TRIM14Q14142 442 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 EIF4HQ15056 248 aaKnown RBP15.12■□□□□ 0.01
SEC13-208ENST00000397109 LPAL2Q16609 132 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 PTPN20Q4JDL3 420 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 DCAF6Q58WW2 860 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 PIK3R6Q5UE93 754 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 EGFLAMQ63HQ2 1017 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 ANO7Q6IWH7 933 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 SLC26A9Q7LBE3 791 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 DCLK2Q8N568 766 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 ZNF397Q8NF99 534 aaPredicted RBP15.12■□□□□ 0.01
SEC13-208ENST00000397109 DDX1Q92499 740 aaKnown RBP15.12■□□□□ 0.01
SEC13-208ENST00000397109 P2RY11Q96G91 374 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 PIWIL1Q96J94 861 aaKnown RBP15.12■□□□□ 0.01
SEC13-208ENST00000397109 LOXL4Q96JB6 756 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 SLC2A13Q96QE2 648 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.12■□□□□ 0.017e-6■□□□□ 8.9
SEC13-208ENST00000397109 RRN3Q9NYV6 651 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 HCN2Q9UL51 889 aa15.12■□□□□ 0.01
SEC13-208ENST00000397109 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.12■□□□□ 0.011e-7■□□□□ 8.8
SEC13-208ENST00000397109 CCP110O43303 1012 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 GFPT2O94808 682 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 IGLV3-25P01717 112 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 ERBB2P04626 1255 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 HOXB2P14652 356 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 SCNN1AP37088 669 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 STAT1P42224 750 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 GABRB2P47870 512 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 JAM2P57087 298 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 MTA1Q13330 715 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 BYSLQ13895 437 aaKnown RBP15.11■□□□□ 0.01
SEC13-208ENST00000397109 TAF5Q15542 800 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 GEN1Q17RS7 908 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 FAM133BQ5BKY9 247 aaKnown RBP15.11■□□□□ 0.01
SEC13-208ENST00000397109 TAF3Q5VWG9 929 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 OLFML1Q6UWY5 402 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 FAM183BPQ6ZVS7 135 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 NOP9Q86U38 636 aaKnown RBP15.11■□□□□ 0.01
SEC13-208ENST00000397109 ERICH1Q86X53 443 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 DEFB106AQ8N104 65 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 FAM160A2Q8N612 972 aaPredicted RBP15.11■□□□□ 0.01
SEC13-208ENST00000397109 ATP6V0D2Q8N8Y2 350 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 MDGA1Q8NFP4 955 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 ADAM32Q8TC27 787 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 EPS8L1Q8TE68 723 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 WFIKKN2Q8TEU8 576 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 C18orf8Q96DM3 657 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 IQCDQ96DY2 449 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 ZC3H10Q96K80 434 aaKnown RBP15.11■□□□□ 0.01
SEC13-208ENST00000397109 BTN2A3PQ96KV6 586 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 TTYH3Q9C0H2 523 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 ZDHHC4Q9NPG8 344 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 NLRC4Q9NPP4 1024 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 TMEM51Q9NW97 253 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 ELOVL2Q9NXB9 296 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 EML5Q05BV3 1969 aa15.11■□□□□ 0.01
SEC13-208ENST00000397109 TCRBV21S2A2A0A5A6 115 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 EPHB6O15197 1021 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 RHOBTB1O94844 696 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 NOS2P35228 1153 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 CCZ1BP86790 482 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 CCZ1P86791 482 aaPredicted RBP15.1■□□□□ 0.01
SEC13-208ENST00000397109 EIF4EBP2Q13542 120 aaPredicted RBP15.1■□□□□ 0.01
SEC13-208ENST00000397109 ELF2Q15723 593 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 RFWD3Q6PCD5 774 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 KBTBD6Q86V97 674 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 HJURPQ8NCD3 748 aaPredicted RBP15.1■□□□□ 0.01
SEC13-208ENST00000397109 GABRG3Q99928 467 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 EDEM3Q9BZQ6 932 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 FAM204AQ9H8W3 233 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms