RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TRAV19A0A0A6YYK7 116 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 UBA1P22314 1058 aaKnown RBP16.02■□□□□ 0.16
GNE-202ENST00000396594 HALP42357 657 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 CASP4P49662 377 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 DRG2P55039 364 aaKnown RBP16.02■□□□□ 0.16
GNE-202ENST00000396594 KDSRQ06136 332 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 SULT2A1Q06520 285 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 DDR1Q08345 913 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 TCEA2Q15560 299 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 RBM22Q9NW64 420 aaKnown RBP eCLIP16.02■□□□□ 0.16
GNE-202ENST00000396594 SPG21Q9NZD8 308 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 MSRAQ9UJ68 235 aa16.02■□□□□ 0.16
GNE-202ENST00000396594 FAM86B1E9PN63 330 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 FKTNO75072 461 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 FAM86B2P0C5J1 330 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 RAD23AP54725 363 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 CSE1LP55060 971 aaKnown RBP16.02■□□□□ 0.15
GNE-202ENST00000396594 TRMT5Q32P41 509 aaKnown RBP16.02■□□□□ 0.15
GNE-202ENST00000396594 TMEM159Q96B96 161 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 ATXN7L3BQ96GX2 97 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 ADAM30Q9UKF2 790 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 PHTF1Q9UMS5 762 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 CORO2BQ9UQ03 480 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 PCDHGC5Q9Y5F6 944 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 RPL22P35268 128 aaKnown RBP16.02■□□□□ 0.15
GNE-202ENST00000396594 STRA8Q7Z7C7 330 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 NR1H4Q96RI1 486 aaPredicted RBP16.02■□□□□ 0.15
GNE-202ENST00000396594 GPAMQ9HCL2 828 aa16.02■□□□□ 0.15
GNE-202ENST00000396594 MRPL17Q9NRX2 175 aaKnown RBP16.02■□□□□ 0.15
GNE-202ENST00000396594 MGAT4DA6NG13 374 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 LACTBL1A8MY62 500 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 ZSCAN9O15535 394 aaPredicted RBP16.01■□□□□ 0.15
GNE-202ENST00000396594 DGKAP23743 735 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 IFNGR2P38484 337 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 ZCCHC9Q8N567 271 aaKnown RBP16.01■□□□□ 0.15
GNE-202ENST00000396594 ARMC2Q8NEN0 867 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 PPTC7Q8NI37 304 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 ZNF398Q8TD17 642 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 DNAJB3Q8WWF6 145 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 BTBD7Q9P203 1132 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 ARHGAP20Q9P2F6 1191 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 DAB1O75553 588 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 FAM163BP0C2L3 166 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 ERVK-10P10266 1014 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 SERPINB3P29508 390 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 IRAK1P51617 712 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 HIRAP54198 1017 aaPredicted RBP16.01■□□□□ 0.15
GNE-202ENST00000396594 SGCGQ13326 291 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 RGMBQ6NW40 437 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 CENPLQ8N0S6 344 aaPredicted RBP16.01■□□□□ 0.15
GNE-202ENST00000396594 TUBGCP3Q96CW5 907 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 CPB2Q96IY4 423 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 BLOC1S4Q9NUP1 217 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 FAM198AQ9UFP1 575 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 SUPT7LO94864 414 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 SERPIND1P05546 499 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 CYP2A13Q16696 494 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 MROH9Q5TGP6 573 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 SRLQ86TD4 932 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 PLD3Q8IV08 490 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 LRRC43Q8N309 656 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 HJURPQ8NCD3 748 aaPredicted RBP16.01■□□□□ 0.15
GNE-202ENST00000396594 CELF4Q9BZC1 486 aaKnown RBP16.01■□□□□ 0.15
GNE-202ENST00000396594 ELOVL6Q9H5J4 265 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 DNMT3LQ9UJW3 386 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 H0Y3Z8 333 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 ATP5C1P36542 298 aaKnown RBP16.01■□□□□ 0.15
GNE-202ENST00000396594 ZNF143P52747 638 aaPredicted RBP16.01■□□□□ 0.15
GNE-202ENST00000396594 FAM110CQ1W6H9 321 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 ARMC12Q5T9G4 340 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 IRGQQ8WZA9 623 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 CENPTQ96BT3 561 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 ATP13A1Q9HD20 1204 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 COMMD8Q9NX08 183 aa16.01■□□□□ 0.15
GNE-202ENST00000396594 C1QTNF3-AMACRE9PGA6 284 aa16■□□□□ 0.15
GNE-202ENST00000396594 ATMINO43313 823 aaPredicted RBP16■□□□□ 0.15
GNE-202ENST00000396594 GUCA1CO95843 209 aa16■□□□□ 0.15
GNE-202ENST00000396594 BCL2L1Q07817 233 aa16■□□□□ 0.15
GNE-202ENST00000396594 C16orf72Q14CZ0 275 aa16■□□□□ 0.15
GNE-202ENST00000396594 PPP1R10Q96QC0 940 aaKnown RBP16■□□□□ 0.15
GNE-202ENST00000396594 CDC42EP4Q9H3Q1 356 aaKnown RBP16■□□□□ 0.15
GNE-202ENST00000396594 NMRK2Q9NPI5 230 aa16■□□□□ 0.15
GNE-202ENST00000396594 IARS2Q9NSE4 1012 aaKnown RBP16■□□□□ 0.15
GNE-202ENST00000396594 THAP1Q9NVV9 213 aa16■□□□□ 0.15
GNE-202ENST00000396594 ZKSCAN7Q9P0L1 754 aaPredicted RBP16■□□□□ 0.15
GNE-202ENST00000396594 TMEM216Q9P0N5 145 aa16■□□□□ 0.15
GNE-202ENST00000396594 RAB21Q9UL25 225 aa16■□□□□ 0.15
GNE-202ENST00000396594 MFHAS1Q9Y4C4 1052 aa16■□□□□ 0.15
GNE-202ENST00000396594 C4BPBP20851 252 aa16■□□□□ 0.15
GNE-202ENST00000396594 KLRC2P26717 231 aa16■□□□□ 0.15
GNE-202ENST00000396594 SNRPD1P62314 119 aaKnown RBP16■□□□□ 0.15
GNE-202ENST00000396594 VGLL4Q14135 290 aa16■□□□□ 0.15
GNE-202ENST00000396594 ILDR2Q71H61 639 aa16■□□□□ 0.15
GNE-202ENST00000396594 KSR1Q8IVT5 923 aa16■□□□□ 0.15
GNE-202ENST00000396594 SAR1AQ9NR31 198 aa16■□□□□ 0.15
GNE-202ENST00000396594 MTA2O94776 668 aa16■□□□□ 0.15
GNE-202ENST00000396594 ICAM3P32942 547 aa16■□□□□ 0.15
GNE-202ENST00000396594 SOAT1P35610 550 aa16■□□□□ 0.15
GNE-202ENST00000396594 KLK7P49862 253 aa16■□□□□ 0.15
GNE-202ENST00000396594 CLCN5P51795 746 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms