RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 CRYBG2Q8N1P7 616 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 EIF1ADQ8N9N8 165 aaKnown RBP18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 FUBP3Q96I24 572 aaKnown RBP eCLIP18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 TNIP3Q96KP6 325 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 HEXIM2Q96MH2 286 aaKnown RBP18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 AP1M1Q9BXS5 423 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 MIS12Q9H081 205 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 SNX25Q9H3E2 840 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 ADAM22Q9P0K1 906 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 LCMT1Q9UIC8 334 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 ANAPC7Q9UJX3 599 aa18.2■□□□□ 0.5
TNFSF13-205ENST00000396545 CALB1P05937 261 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 GNL1P36915 607 aaPredicted RBP18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 SLC1A1P43005 524 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 MARCKSL1P49006 195 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 MRPS25P82663 173 aaKnown RBP18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 PDGFRLQ15198 375 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 CSRP2Q16527 193 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 KLHL7Q8IXQ5 586 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 OR6B3Q8NGW1 331 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 NETO1Q8TDF5 533 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 TFAP2BQ92481 460 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 MRPL45Q9BRJ2 306 aaKnown RBP18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 MRPL47Q9HD33 250 aaKnown RBP18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 SCINQ9Y6U3 715 aa18.19■□□□□ 0.5
TNFSF13-205ENST00000396545 LAMA1P25391 3075 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 DCDC2BA2VCK2 349 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 SART1O43290 800 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 SPOPO43791 374 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 ZNF211Q13398 564 aaPredicted RBP18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 PPP2R5EQ16537 467 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 FAM171BQ6P995 826 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 LCLAT1Q6UWP7 414 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 PRR23CQ6ZRP0 262 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 CPNE8Q86YQ8 564 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 SPATA2LQ8IUW3 424 aaPredicted RBP18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 GSPT2Q8IYD1 628 aaKnown RBP18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 FAM160A2Q8N612 972 aaPredicted RBP18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 KBTBD7Q8WVZ9 684 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 CAVIN3Q969G5 261 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 TWNKQ96RR1 684 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 SLC22A12Q96S37 553 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 C11orf70Q9BRQ4 267 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 STRIP2Q9ULQ0 834 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 CHD8Q9HCK8 2581 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 SDK1Q7Z5N4 2213 aa18.18■□□□□ 0.5
TNFSF13-205ENST00000396545 CCDC163A0A0D9SF12 145 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 TCRBV5S1A1TA0A578 114 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 A8MXQ7 604 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 O00370 1275 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 SETSIPP0DME0 302 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 MAGEA11P43364 429 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 SNX16P57768 344 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 USP4Q13107 963 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 NNTQ13423 1086 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 MAMLD1Q13495 774 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 ZNF77Q15935 545 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 ARHGAP17Q68EM7 881 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 EMBQ6PCB8 327 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 MMS22LQ6ZRQ5 1243 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 CEP68Q76N32 757 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 EPB41L5Q9HCM4 733 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 FBRSL1Q9HCM7 1045 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 TRPC7Q9HCX4 862 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 SPAG17Q6Q759 2223 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 TRAV19A0A0A6YYK7 116 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 SLC30A4O14863 429 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 ATG13O75143 517 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 ATP2C2O75185 946 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 PROSCO94903 275 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 EGFP01133 1207 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 MAN1A1P33908 653 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 GJA4P35212 333 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 RWDD2BP57060 319 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 GUCY2DQ02846 1103 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 NAIF1Q69YI7 327 aaPredicted RBP18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 OSCP1Q8WVF1 389 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 GAB3Q8WWW8 586 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 CYP2S1Q96SQ9 504 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 SYT15Q9BQS2 421 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 TRIM7Q9C029 511 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 DDX47Q9H0S4 455 aaKnown RBP18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 ECT2Q9H8V3 914 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 WDR35Q9P2L0 1181 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 HMGXB4Q9UGU5 601 aa18.17■□□□□ 0.5
TNFSF13-205ENST00000396545 RALGAPA1Q6GYQ0 2036 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 ANAPC1Q9H1A4 1944 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 GOLGA6L10A0A0M3HER8 536 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 MYO1FO00160 1098 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 RNF40O75150 1001 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 CKMP06732 381 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 USP17L7P0C7H9 530 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 PYGMP11217 842 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 DRD1P21728 446 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 LMO2P25791 158 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 PXNP49023 591 aaPredicted RBP18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 GALK1P51570 392 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms