RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 FBXL13Q8NEE6 735 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 SNX19Q92543 992 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 TM9SF3Q9HD45 589 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 CISHQ9NSE2 258 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 TPX2Q9ULW0 747 aaKnown RBP18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 RAXQ9Y2V3 346 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 CABIN1Q9Y6J0 2220 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 URB1O60287 2271 aaKnown RBP18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 XPO1O14980 1071 aaKnown RBP18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 TSPAN3O60637 253 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 RHOBTB3O94955 611 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 DLDP09622 509 aaKnown RBP18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 TRIM49P0CI25 452 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 TRIM49CP0CI26 452 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 HLA-FP30511 346 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 ACSL1P33121 698 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 RAD23BP54727 409 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 ADAM9Q13443 819 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 SMAD1Q15797 465 aaKnown RBP18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 ZNF394Q53GI3 561 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 USP30Q70CQ3 517 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 KIAA0907Q7Z7F0 614 aaPredicted RBP18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 FAM124AQ86V42 546 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 SLC4A11Q8NBS3 891 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 SORCS1Q8WY21 1168 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 ARID3AQ99856 593 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 C6orf106Q9H6K1 298 aaPredicted RBP18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 LRRC4Q9HBW1 653 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 ABCC13Q9NSE7 274 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 RAB20Q9NX57 234 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 HESX1Q9UBX0 185 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 KIAA1257Q9ULG3 409 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 CLEC4EQ9ULY5 219 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 NCKAP1Q9Y2A7 1128 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 SNX11Q9Y5W9 270 aa18.27■□□□□ 0.52
EXOSC3-202ENST00000396521 MYH10P35580 1976 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 A0A087WV48 116 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 TRABD2BA6NFA1 517 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 EIF4E1BA6NMX2 242 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 IRAK2O43187 625 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 YWHAEP62258 255 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 RACK1P63244 317 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 PTPRNQ16849 979 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 CHST9Q7L1S5 443 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 TMPRSS12Q86WS5 348 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 FMNL3Q8IVF7 1028 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 SCML4Q8N228 414 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 HNRNPLLQ8WVV9 542 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 SNX21Q969T3 373 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 BIRC7Q96CA5 298 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 GGA2Q9UJY4 613 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 PCDHGA1Q9Y5H4 931 aa18.26■□□□□ 0.51
EXOSC3-202ENST00000396521 ADAMTS20P59510 1910 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 RNASEH1O60930 286 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 HSP90AA1P07900 732 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 C1SP09871 688 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 PABPC1P11940 636 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 HLA-EP13747 358 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 POLR2EP19388 210 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 MXI1P50539 228 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 RPS14P62263 151 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 EDRF1Q3B7T1 1238 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 BSPRYQ5W0U4 402 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 ZNF776Q68DI1 518 aaPredicted RBP18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 ADAT2Q7Z6V5 191 aaKnown RBP18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 ADIPOR2Q86V24 386 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 UNC45BQ8IWX7 931 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 KDM1BQ8NB78 822 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 AZIN2Q96A70 460 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 ACE2Q9BYF1 805 aaPredicted RBP18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 ULBP1Q9BZM6 244 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 PRSS16Q9NQE7 514 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 ABCB8Q9NUT2 735 aa18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.25■□□□□ 0.51
EXOSC3-202ENST00000396521 YKT6O15498 198 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 SETSIPP0DME0 302 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 CTSKP43235 329 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 SLC11A2P49281 568 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 C21orf59P57076 290 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 CYP4F3Q08477 520 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 BST2Q10589 180 aaKnown RBP18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 CAMK2BQ13554 666 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 FOXD4L6Q3SYB3 417 aaPredicted RBP18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 SGO2Q562F6 1265 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 FOXD4L5Q5VV16 416 aaPredicted RBP18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 MBLAC2Q68D91 279 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 FOXD4L3Q6VB84 417 aaPredicted RBP18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 CACUL1Q86Y37 369 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 SIX6OS1Q8N1H7 587 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 FOXD4L4Q8WXT5 416 aaPredicted RBP18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 KCTD13Q8WZ19 329 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 CCDC34Q96HJ3 373 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 DDX50Q9BQ39 737 aaKnown RBP18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 CNGB3Q9NQW8 809 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 FTSJ1Q9UET6 329 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 KNTC1P50748 2209 aa18.24■□□□□ 0.51
EXOSC3-202ENST00000396521 VILLO15195 856 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 FSBPO95073 299 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 ASLP04424 464 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms