RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ATAD3BQ5T9A4 648 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ILDR2Q71H61 639 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GLT6D1Q7Z4J2 308 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ST13P5Q8NFI4 369 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 FBXO25Q8TCJ0 367 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SPIRE2Q8WWL2 714 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 RMND5BQ96G75 393 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 OSBPL6Q9BZF3 934 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ZCWPW1Q9H0M4 648 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 NMRAL1Q9HBL8 299 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SNTG2Q9NY99 539 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 FAM205AQ6ZU69 1335 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 NRCAMQ92823 1304 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 A0A087X1B8 175 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF286BP0CG31 522 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 AKR1A1P14550 325 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GRK4P32298 578 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GLRBP48167 497 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ALDH5A1P51649 535 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TBX4P57082 545 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ADIGQ0VDE8 80 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CRYMQ14894 314 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 FAXCQ5TGI0 409 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ARHGAP17Q68EM7 881 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 FAM45BPQ6NSW5 357 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF571Q7Z3V5 609 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PTAR1Q7Z6K3 402 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ATG16L2Q8NAA4 619 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 MCOLN3Q8TDD5 553 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 HTR3CQ8WXA8 447 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GLMNQ92990 594 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 MED8Q96G25 268 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CASTOR2A6NHX0 329 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ERI2A8K979 691 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ACKR2O00590 384 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SCNN1BP51168 640 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ANGPT1Q15389 498 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CBWD3Q5JTY5 395 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CBWD5Q5RIA9 395 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 USP45Q70EL2 814 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ACER1Q8TDN7 264 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 OSMRQ99650 979 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 AVENQ9NQS1 362 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 V9GYQ6 96 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 A0A088AWK7 358 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 JCHAINP01591 159 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CXCL8P10145 99 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF10P21506 573 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PTPN4P29074 926 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CYP2C18P33260 490 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 UBE3AQ05086 875 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 DDX39BQ13838 428 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GNA13Q14344 377 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SCARA3Q6AZY7 606 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 METTL3Q86U44 580 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 KYQ8NBH2 561 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 B3GALNT2Q8NCR0 500 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 WDR48Q8TAF3 677 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ACTL9Q8TC94 416 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ACTR8Q9H981 624 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TCRBV5S4A2TA0A5A2 114 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CD3EAPO15446 510 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 RIPK2O43353 540 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ZBTB14O43829 449 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GUCY1B2O75343 617 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SLITRK3O94933 977 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CLPTM1O96005 669 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TMED10P49755 219 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 HIRAP54198 1017 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PPATQ06203 517 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SGCGQ13326 291 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 NTRK3Q16288 839 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GSTA3Q16772 222 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 IQSEC1Q6DN90 963 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TMPRSS6Q8IU80 811 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 C19orf18Q8NEA5 215 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SLC5A5Q92911 643 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 MAGED4Q96JG8 741 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 MAGEB10Q96LZ2 347 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 KCTD14Q9BQ13 255 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 RAD18Q9NS91 495 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 NDUFAF1Q9Y375 327 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CYP2A6P11509 494 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 INSRRP14616 1297 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ATP6V1C1P21283 382 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SOX11P35716 441 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 LY6KQ17RY6 165 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TMEM132CQ8N3T6 1108 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 FNDC5Q8NAU1 212 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PNKPQ96T60 521 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 OLFM1Q99784 485 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 FUT8Q9BYC5 575 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 L1RE1Q9UN81 338 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 NCKAP1Q9Y2A7 1128 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SPATA31D1Q6ZQQ2 1576 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SMIM31A0A1B0GVY4 71 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 FGF10O15520 208 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CYP1A1P04798 512 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 YWHAQP27348 245 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 HALP42357 657 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms