RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 MAGOHBQ96A72 148 aaKnown RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 CSPG4P5Q96PW8 444 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 KCTD15Q96SI1 283 aaPredicted RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 PARD6BQ9BYG5 372 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 LRRC19Q9H756 370 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 MTMR10Q9NXD2 777 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 CWC15Q9P013 229 aaKnown RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 ZNF510Q9Y2H8 683 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 C2orf78A6NCI8 922 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 MOCS2O96007 188 aaPredicted RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 RHOXF2BP0C7M4 288 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 HOXB8P17481 243 aaPredicted RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 IL4RP24394 825 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 SERPINB6P35237 376 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 SLC7A9P82251 487 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 KCNC3Q14003 757 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 TXNDC8Q6A555 127 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 SLC9A4Q6AI14 798 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 C8orf74Q6P047 294 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 DRICH1Q6PGQ1 229 aaPredicted RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 HS6ST3Q8IZP7 471 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 SMG7Q92540 1137 aaKnown RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 HAUS1Q96CS2 278 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 PNKPQ96T60 521 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 RHOXF2Q9BQY4 288 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 DNMT3BQ9UBC3 853 aaKnown RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 LSM7Q9UK45 103 aaKnown RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 RAD54BQ9Y620 910 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 TRANK1O15050 2925 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 MYO7AQ13402 2215 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 GOT1P17174 413 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 EPHB2P29323 1055 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 SEMA3BQ13214 749 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 DHX34Q14147 1143 aaKnown RBP14.14□□□□□ -0.15
VAPB-202ENST00000395802 MAB21L3Q8N8X9 362 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 FERMT1Q9BQL6 677 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 KLF16Q9BXK1 252 aaPredicted RBP14.14□□□□□ -0.15
VAPB-202ENST00000395802 RNF38Q9H0F5 515 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 SIK2Q9H0K1 926 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 IGFLR1Q9H665 355 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 TASP1Q9H6P5 420 aa14.14□□□□□ -0.15
VAPB-202ENST00000395802 PPARGC1AQ9UBK2 798 aaKnown RBP14.14□□□□□ -0.15
VAPB-202ENST00000395802 RFXAPO00287 272 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 MCF2LO15068 1137 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 NCAM2O15394 837 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 LRIG2O94898 1065 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 HMBSP08397 361 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 MCM3P25205 808 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 DYNLT1P63172 113 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 LLGL1Q15334 1064 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 CCDC137Q6PK04 289 aaKnown RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 TMCO3Q6UWJ1 677 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 KLHL7Q8IXQ5 586 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 CCDC105Q8IYK2 499 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 PYROXD2Q8N2H3 581 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 LZTR1Q8N653 840 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 ARL14EPQ8N8R7 260 aaPredicted RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 PRELID2Q8N945 189 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 ATL2Q8NHH9 583 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 PCDH19Q8TAB3 1148 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 TBC1D31Q96DN5 1066 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 KRT12Q99456 494 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 PCYOX1Q9UHG3 505 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 RAB21Q9UL25 225 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 MRPS23Q9Y3D9 190 aaKnown RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 HS3ST4Q9Y661 456 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 TARSL2A2RTX5 802 aaKnown RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 F5H5T6 163 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 ACSL4O60488 711 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 GAS8O95995 478 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 CYP4F8P98187 520 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 MMRN1Q13201 1228 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 BYSLQ13895 437 aaKnown RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 DPYSQ14117 519 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 TCEAL5Q5H9L2 206 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 MS4A13Q5J8X5 152 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 GPR158Q5T848 1215 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 ZNF697Q5TEC3 545 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 RWDD4Q6NW29 188 aaKnown RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 SYDE1Q6ZW31 735 aaPredicted RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 GRASPQ7Z6J2 395 aaPredicted RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 PLD5Q8N7P1 536 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 SHKBP1Q8TBC3 707 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 CCHCR1Q8TD31 782 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 RUBCNQ92622 972 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 ZNF707Q96C28 371 aaPredicted RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 DDX47Q9H0S4 455 aaKnown RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 ANLNQ9NQW6 1124 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 ARHGEF4Q9NR80 690 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 HCFC1R1Q9NWW0 138 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 ARHGAP26Q9UNA1 814 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 DRG1Q9Y295 367 aaKnown RBP14.13□□□□□ -0.15
VAPB-202ENST00000395802 SH3BP1Q9Y3L3 701 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 CPQQ9Y646 472 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 CDH23Q9H251 3354 aa14.13□□□□□ -0.15
VAPB-202ENST00000395802 TCRBV7S2A1N4TA0A589 114 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 TYW5A2RUC4 315 aaKnown RBP14.12□□□□□ -0.15
VAPB-202ENST00000395802 E9PAM4 449 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 STC2O76061 302 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 POU3F3P20264 500 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms