RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 MORF4L2Q15014 288 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 TRIP13Q15645 432 aaPredicted RBP15.66■□□□□ 0.1
SCAF11-204ENST00000395454 CDO1Q16878 200 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 KDM7AQ6ZMT4 941 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 GSTA5Q7RTV2 222 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 SCML4Q8N228 414 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 SLC22A17Q8WUG5 538 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 NPY6RQ99463 290 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 CNGB3Q9NQW8 809 aa15.66■□□□□ 0.1
SCAF11-204ENST00000395454 HHLA1C9JL84 531 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 LRG1P02750 347 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 ATF6P18850 670 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 POU3F3P20264 500 aaPredicted RBP15.65■□□□□ 0.1
SCAF11-204ENST00000395454 CHKAP35790 457 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 RPL10AP62906 217 aaKnown RBP15.65■□□□□ 0.1
SCAF11-204ENST00000395454 YWHAZP63104 245 aaKnown RBP15.65■□□□□ 0.1
SCAF11-204ENST00000395454 SLC29A2Q14542 456 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 P3H1Q32P28 736 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 ERMARDQ5T6L9 678 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 RNASEH2BQ5TBB1 312 aaKnown RBP15.65■□□□□ 0.1
SCAF11-204ENST00000395454 HOOK3Q86VS8 718 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 RFX6Q8HWS3 928 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 PQLC3Q8N755 202 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 GIPC2Q8TF65 315 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 MYLIPQ8WY64 445 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 RTP4Q96DX8 246 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 PGM2Q96G03 612 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 CDX2Q99626 313 aaPredicted RBP15.65■□□□□ 0.1
SCAF11-204ENST00000395454 TMEM121Q9BTD3 319 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 CDC42EP4Q9H3Q1 356 aaKnown RBP15.65■□□□□ 0.1
SCAF11-204ENST00000395454 PRDM16Q9HAZ2 1276 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 MTMR10Q9NXD2 777 aa15.65■□□□□ 0.1
SCAF11-204ENST00000395454 RCOR3Q9P2K3 495 aaPredicted RBP15.65■□□□□ 0.1
SCAF11-204ENST00000395454 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
SCAF11-204ENST00000395454 A6NNZ2 444 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 MCF2LO15068 1137 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 RFPL2O75678 378 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 C1RP00736 705 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 L1CAMP32004 1257 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 NOS2P35228 1153 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 DYNLT1P63172 113 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 IFRD2Q12894 506 aaPredicted RBP15.64■□□□□ 0.09
SCAF11-204ENST00000395454 CBLBQ13191 982 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 MMRN1Q13201 1228 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 TUBB8Q3ZCM7 444 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 GLIPR1L2Q4G1C9 344 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 ANKRD20A8PQ5CZ79 823 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 ZC3H12AQ5D1E8 599 aaKnown RBP15.64■□□□□ 0.09
SCAF11-204ENST00000395454 TNFAIP8L3Q5GJ75 292 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 PPM1LQ5SGD2 360 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 ELMSAN1Q6PJG2 1045 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 PLD5Q8N7P1 536 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 VN1R2Q8NFZ6 395 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 TLCD1Q96CP7 247 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 HAUS1Q96CS2 278 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 C8orf48Q96LL4 319 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 LRRC4Q9HBW1 653 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 PNPLA8Q9NP80 782 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 SAE1Q9UBE0 346 aaPredicted RBP15.64■□□□□ 0.09
SCAF11-204ENST00000395454 TPX2Q9ULW0 747 aaKnown RBP15.64■□□□□ 0.09
SCAF11-204ENST00000395454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.64■□□□□ 0.09
SCAF11-204ENST00000395454 TTC4O95801 387 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 SLC5A3P53794 718 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 DAOAP59103 153 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 KRT81Q14533 505 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 VEPH1Q14D04 833 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 CA9Q16790 459 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 EP400NLQ6ZTU2 488 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 DENND5BQ6ZUT9 1274 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 GPRIN1Q7Z2K8 1008 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 DEFB106AQ8N104 65 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 PCDH19Q8TAB3 1148 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 CASP10Q92851 521 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 CALCOCO1Q9P1Z2 691 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 USP3Q9Y6I4 520 aa15.64■□□□□ 0.09
SCAF11-204ENST00000395454 SGK1O00141 431 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 SMAPO00193 183 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 LINC01565O15544 149 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 TCEA3O75764 348 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 GLP2RO95838 553 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 SHBGP04278 402 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 SRGAP2BP0DMP2 458 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 FOSL2P15408 326 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 STIP1P31948 543 aaKnown RBP15.63■□□□□ 0.09
SCAF11-204ENST00000395454 VPS41P49754 854 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 TKTL1P51854 596 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 EPHB3P54753 998 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 GDF10P55107 478 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 EIF3EP60228 445 aaKnown RBP15.63■□□□□ 0.09
SCAF11-204ENST00000395454 PLD1Q13393 1074 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 KCNC3Q14003 757 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 TAF12Q16514 161 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 BHLHA9Q7RTU4 235 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 PCGF5Q86SE9 256 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 SIX6OS1Q8N1H7 587 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 SH2D3CQ8N5H7 860 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 EFHBQ8N7U6 833 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 SCAMP5Q8TAC9 235 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 PGAP3Q96FM1 320 aaPredicted RBP15.63■□□□□ 0.09
SCAF11-204ENST00000395454 GUCD1Q96NT3 240 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms