RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 XPNPEP3Q9NQH7 507 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 TXNDC16Q9P2K2 825 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 AP4B1Q9Y6B7 739 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 DOCK5Q9H7D0 1870 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 ITGB3P05106 788 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 SMIM18P0DKX4 95 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 COX4I1P13073 169 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 XRCC1P18887 633 aaPredicted RBP14.73□□□□□ -0.05
CLIP2-203ENST00000395060 MGAT1P26572 445 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 CRHR1P34998 444 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 TAP1Q03518 808 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 PCLAFQ15004 111 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 PABPC1LQ4VXU2 614 aaKnown RBP14.73□□□□□ -0.05
CLIP2-203ENST00000395060 SNX32Q86XE0 403 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 TMA16Q96EY4 203 aaKnown RBP14.73□□□□□ -0.05
CLIP2-203ENST00000395060 PORCNQ9H237 461 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 ASNSD1Q9NWL6 643 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 PHF24Q9UPV7 400 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 CNTN6Q9UQ52 1028 aa14.73□□□□□ -0.05
CLIP2-203ENST00000395060 SF3B1O75533 1304 aaKnown RBP eCLIP14.73□□□□□ -0.053e-6■■■■■ 137.9
CLIP2-203ENST00000395060 H3BNX3 289 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 CRTAMO95727 393 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 GSRP00390 522 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 RALBP11234 206 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 FAM183BPQ6ZVS7 135 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 PLD6Q8N2A8 252 aaKnown RBP14.72□□□□□ -0.05
CLIP2-203ENST00000395060 FBXW8Q8N3Y1 598 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 LGMNQ99538 433 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 ELOVL4Q9GZR5 314 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 KLHL2O95198 593 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 CHRNGP07510 517 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 THOP1P52888 689 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 FLOT2Q14254 428 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 ZNF667Q5HYK9 610 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 ABHD15Q6UXT9 468 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 FAM83AQ86UY5 434 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 BRSK2Q8IWQ3 736 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 RAB3IL1Q8TBN0 382 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 SIGLEC10Q96LC7 697 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 EBNA1BP2Q99848 306 aaKnown RBP14.72□□□□□ -0.05
CLIP2-203ENST00000395060 SSX2IPQ9Y2D8 614 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 DNAJA2O60884 412 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 OATP04181 439 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 ARSAP15289 507 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 GPD1P21695 349 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 GLRBP48167 497 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 IRF9Q00978 393 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 CNTN2Q02246 1040 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 EEF1DP3Q658K8 133 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 AGBL3Q8NEM8 1001 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 TMIGD2Q96BF3 282 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 HSPBAP1Q96EW2 488 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 SORT1Q99523 831 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 PIM2Q9P1W9 311 aa14.72□□□□□ -0.05
CLIP2-203ENST00000395060 MRPL42Q9Y6G3 142 aaKnown RBP14.72□□□□□ -0.05
CLIP2-203ENST00000395060 PLIN3O60664 434 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 TNNC2P02585 160 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 HNRNPCP07910 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 NFICP08651 508 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 PRKCHP24723 683 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 CDKL1Q00532 357 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 SLC10A2Q12908 348 aaPredicted RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 TFDP2Q14188 446 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 DLK2Q6UY11 383 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 NAPRTQ6XQN6 538 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 MICALL2Q8IY33 904 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 PQLC1Q8N2U9 271 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 DGCR14Q96DF8 476 aaKnown RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 CMTM5Q96DZ9 223 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 CATSPER2Q96P56 530 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 SNRNP25Q9BV90 132 aaKnown RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 DEFB129Q9H1M3 183 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 GNEQ9Y223 722 aaKnown RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 CCNT2O60583 730 aaKnown RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 SPAG6O75602 509 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 SUPT20HL2P0C7V6 817 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 IL4RP24394 825 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 NAMPTP43490 491 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 PTPN11Q06124 597 aaPredicted RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 HNRNPDQ14103 355 aaKnown RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 SUPT20HL1Q3ZLR7 823 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 WDR78Q5VTH9 848 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 AAGABQ6PD74 315 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 KCNT2Q6UVM3 1135 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 ZNF534Q76KX8 674 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 PYROXD2Q8N2H3 581 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 SPATA6LQ8N4H0 392 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 UBR7Q8N806 425 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 BHLHE22Q8NFJ8 381 aaPredicted RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 NCSTNQ92542 709 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 ZNF512Q96ME7 567 aaPredicted RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 APOL2Q9BQE5 337 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 NUF2Q9BZD4 464 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 XYLT2Q9H1B5 865 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 TMPRSS4Q9NRS4 437 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 CHCHD3Q9NX63 227 aaKnown RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 RGS17Q9UGC6 210 aaPredicted RBP14.71□□□□□ -0.05
CLIP2-203ENST00000395060 ARHGAP26Q9UNA1 814 aa14.71□□□□□ -0.05
CLIP2-203ENST00000395060 TMEM62Q0P6H9 643 aa14.7□□□□□ -0.06
CLIP2-203ENST00000395060 KLF10Q13118 480 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms