RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 HNRNPCL1O60812 293 aaKnown RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 ATP6AP2O75787 350 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 EFNA5P52803 228 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 HADHBP55084 474 aaKnown RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 SLC5A9Q2M3M2 681 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 DPY19L2Q6NUT2 758 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 PAOXQ6QHF9 649 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 DNERQ8NFT8 737 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 PPP2R3CQ969Q6 453 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 SERPINI1Q99574 410 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 LRRC4Q9HBW1 653 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 GALNT8Q9NY28 637 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 STX18Q9P2W9 335 aaKnown RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 EPS15L1Q9UBC2 864 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 ZNF212Q9UDV6 495 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 ACTL7BQ9Y614 415 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 SAC3D1A6NKF1 404 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 LACTBL1A8MY62 500 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 MOCS2O96007 188 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 CYP1A1P04798 512 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 CSH1P0DML2 217 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 CSH2P0DML3 217 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 KLRC2P26717 231 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 USP46P62068 366 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 PCSK7Q16549 785 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 FSCBQ5H9T9 825 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 STRA8Q7Z7C7 330 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 BANPQ8N9N5 519 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 C12orf50Q8NA57 414 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 CMTM5Q96DZ9 223 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 PANX3Q96QZ0 392 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 WARS2Q9UGM6 360 aaKnown RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 TDRKHQ9Y2W6 561 aaKnown RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 STX16-NPEPL1H3BU86 382 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 PRPF4O43172 522 aaKnown RBP eCLIP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 TSPAN3O60637 253 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 ASS1P00966 412 aaKnown RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 STAG3L1P0CL83 205 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 PHEXP78562 749 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 PTPN11Q06124 597 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-202ENST00000394820 KIZQ2M2Z5 673 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 C6orf52Q5T4I8 152 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 KBTBD2Q8IY47 623 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 ZNF786Q8N393 782 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 AFG1LQ8WV93 481 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 CYGBQ8WWM9 190 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 PFDN4Q9NQP4 134 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 CHST12Q9NRB3 414 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 DOLKQ9UPQ8 538 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 SSX2IPQ9Y2D8 614 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 LRRC42Q9Y546 428 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 CITO14578 2027 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 MAFO75444 373 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-202ENST00000394820 CPA3P15088 417 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 STIP1P31948 543 aaKnown RBP13.58□□□□□ -0.24
NFKB1-202ENST00000394820 RAB27AP51159 221 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 RPS6KA3P51812 740 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 NAGLUP54802 743 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 PLEKHA7Q6IQ23 1121 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 TRIM67Q6ZTA4 783 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 DPP9Q86TI2 863 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 PIWIL2Q8TC59 973 aaKnown RBP13.58□□□□□ -0.24
NFKB1-202ENST00000394820 BFARQ9NZS9 450 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 TSPAN16Q9UKR8 245 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 LAMA3Q16787 3333 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 MTA2O94776 668 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 NDST1P52848 882 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 FOLH1Q04609 750 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 ACVR2BQ13705 512 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 MXD4Q14582 209 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-202ENST00000394820 CNPY1Q3B7I2 92 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 EFHC2Q5JST6 749 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 MPZL3Q6UWV2 235 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 ACAD11Q709F0 780 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 MARK2Q7KZI7 788 aaKnown RBP13.58□□□□□ -0.24
NFKB1-202ENST00000394820 THEGQ9P2T0 379 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 GPR25O00155 361 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 FOXD2O60548 495 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-202ENST00000394820 MSCO60682 206 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 MICAL2O94851 1124 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 APOEP02649 317 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 ERBB2P04626 1255 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 C16orf72Q14CZ0 275 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 LIN52Q52LA3 116 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 TMEM198Q66K66 360 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 DHDDSQ86SQ9 333 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 WDR49Q8IV35 697 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 OR6P1Q8NGX9 317 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 PHF21BQ96EK2 531 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 CELF6Q96J87 481 aaKnown RBP13.58□□□□□ -0.24
NFKB1-202ENST00000394820 FAM167AQ96KS9 214 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 TWNKQ96RR1 684 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 CCDC90BQ9GZT6 254 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 CDT1Q9H211 546 aa13.58□□□□□ -0.24
NFKB1-202ENST00000394820 KLHL2O95198 593 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 OAS1P00973 400 aaKnown RBP13.57□□□□□ -0.24
NFKB1-202ENST00000394820 ALADP13716 330 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 CYP2F1P24903 491 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 RIOX2Q8IUF8 465 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 COLGALT1Q8NBJ5 622 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms