RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 NR1H4Q96RI1 486 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 GMLQ99445 158 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 PFDN4Q9NQP4 134 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 MRGBPQ9NV56 204 aa11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-209ENST00000394804 HOXC6P09630 235 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 MLH1P40692 756 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 CCNHP51946 323 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 LCLAT1Q6UWP7 414 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 CES3Q6UWW8 571 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 USP33Q8TEY7 942 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 EME1Q96AY2 570 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 INPP5FQ9Y2H2 1132 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 LRRC42Q9Y546 428 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 A0A096LPK6 155 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 CYB561D2O14569 222 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 ZNF132P52740 706 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 NRLP54845 237 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 ABCE1P61221 599 aaKnown RBP11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 RYBPQ8N488 228 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 C12orf29Q8N999 325 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 OR6J1Q8NGC5 347 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 RNF139Q8WU17 664 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 MCRS1Q96EZ8 462 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 ECSITQ9BQ95 431 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 TRIM15Q9C019 465 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 MAF1Q9H063 256 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 C2CD4BA6NLJ0 364 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 DFFAO00273 331 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 RAG1P15918 1043 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 TPSB2P20231 275 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 CLDN10P78369 228 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 TPSAB1Q15661 275 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 KIZQ2M2Z5 673 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 FBXO47Q5MNV8 452 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 TLDC1Q6P9B6 456 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 AAGABQ6PD74 315 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 DHDDSQ86SQ9 333 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 GALNT4Q8N4A0 578 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 CEP70Q8NHQ1 597 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 EXT2Q93063 718 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 ZNF333Q96JL9 665 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 PPP2R3BQ9Y5P8 575 aa11.98□□□□□ -0.49
UBE2D3-209ENST00000394804 MPOP05164 745 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 FAM200BP0CF97 657 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 TCN1P20061 433 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 SP100P23497 879 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 ROR2Q01974 943 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 CYLC2Q14093 348 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 THEMIS2Q5TEJ8 643 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 CGB2Q6NT52 195 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 ENDOVQ8N8Q3 282 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 KYQ8NBH2 561 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 SLC7A6OSQ96CW6 309 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 HIC2Q96JB3 615 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 APOL2Q9BQE5 337 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 AP5M1Q9H0R1 490 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 ASCC2Q9H1I8 757 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 EFCAB1Q9HAE3 211 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 EML4Q9HC35 981 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 IARS2Q9NSE4 1012 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 CNTN6Q9UQ52 1028 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 SLCO1B7G3V0H7 640 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 KCNK1O00180 336 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 DNAJC6O75061 913 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 LYPLA1O75608 230 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 ERVK-10P10266 1014 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 RARBP10826 455 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 CDH5P33151 784 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 SLC18A2Q05940 514 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 CYTH1Q15438 398 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 PDCD2Q16342 344 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 HSDL1Q3SXM5 330 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 PACS1Q6VY07 963 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 DEFB106AQ8N104 65 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 DDIT4Q9NX09 232 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 SNTG2Q9NY99 539 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 MORF4L1Q9UBU8 362 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 ITGA2BP08514 1039 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 PSMB4P28070 264 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 HSPA13P48723 471 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 GBE1Q04446 702 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 LRRC8EQ6NSJ5 796 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 LINC00523Q86TU6 105 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 OR6Y1Q8NGX8 325 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 CERS2Q96G23 380 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 ELMO2Q96JJ3 720 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 CLPTM1LQ96KA5 538 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 DRC3Q9H069 523 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 TEX264Q9Y6I9 313 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 KIF13BQ9NQT8 1826 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 PABPN1LA6NDY0 278 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 TRAFD1O14545 582 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 DDNO94850 711 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 NCAM1P13591 858 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 WNT7BP56706 349 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 PPP1R26Q5T8A7 1209 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 UNC93AQ86WB7 457 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 GSTCDQ8NEC7 633 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms