RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CUL1Q13616 776 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 DPYSL3Q14195 570 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 PKN2Q16513 984 aaKnown RBP7.2□□□□□ -1.26
RTN4-205ENST00000394609 DDR2Q16832 855 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 BOLA3Q53S33 107 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 RAB41Q5JT25 222 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 AGBL2Q5U5Z8 902 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 FUT10Q6P4F1 479 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 TLDC1Q6P9B6 456 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 CNKSR3Q6P9H4 555 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 RSPO2Q6UXX9 243 aaPredicted RBP7.2□□□□□ -1.26
RTN4-205ENST00000394609 ARCQ7LC44 396 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 GSTA5Q7RTV2 222 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 RFX6Q8HWS3 928 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 LRRC43Q8N309 656 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 CCDC185Q8N715 623 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 TSEN2Q8NCE0 465 aaKnown RBP7.2□□□□□ -1.26
RTN4-205ENST00000394609 ATL2Q8NHH9 583 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 GPR152Q8TDT2 470 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 CENPTQ96BT3 561 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 ZIM3Q96PE6 472 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 SNRNP25Q9BV90 132 aaKnown RBP7.2□□□□□ -1.26
RTN4-205ENST00000394609 MAK16Q9BXY0 300 aaKnown RBP7.2□□□□□ -1.26
RTN4-205ENST00000394609 ZCWPW1Q9H0M4 648 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 DHX35Q9H5Z1 703 aaKnown RBP7.2□□□□□ -1.26
RTN4-205ENST00000394609 POPDC2Q9HBU9 364 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 CNGB3Q9NQW8 809 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 HOMER3Q9NSC5 361 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 ASIC3Q9UHC3 531 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 RASAL2Q9UJF2 1139 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 ZNF148Q9UQR1 794 aa7.2□□□□□ -1.26
RTN4-205ENST00000394609 SF3B1O75533 1304 aaKnown RBP eCLIP7.2□□□□□ -1.262e-6■■■■■ 114.9
RTN4-205ENST00000394609 GMNCA6NCL1 334 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 SYN3O14994 580 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 DAB1O75553 588 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 SOAT2O75908 522 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 DGKIO75912 1065 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 FBXO21O94952 628 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 TIMP1P01033 207 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 ZSCAN5DPP0CG00 497 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 HSPA1AP0DMV8 641 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 HSPA1BP0DMV9 641 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 RAG1P15918 1043 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 FGFR3P22607 806 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 NOS2P35228 1153 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 PTPN7P35236 360 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 GPR15P49685 360 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 PGFP49763 221 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 ARSEP51690 589 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 OTUD4Q01804 1114 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 MTMR3Q13615 1198 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 BYSLQ13895 437 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 TAZQ16635 292 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 RTP2Q5QGT7 225 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 FAM182AQ5T1J6 154 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 SPOUT1Q5T280 376 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 ERMARDQ5T6L9 678 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 OTUD1Q5VV17 481 aaPredicted RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 CYB5D1Q6P9G0 228 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 C1orf228Q6PIY5 440 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 PRSS55Q6UWB4 352 aaPredicted RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 LYPD4Q6UWN0 246 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 NPNTQ6UXI9 565 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 C4orf50Q6ZRC1 276 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 BBS12Q6ZW61 710 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 BHLHA9Q7RTU4 235 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 NECAB2Q7Z6G3 386 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 APLFQ8IW19 511 aaPredicted RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 PYROXD2Q8N2H3 581 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 TTC9BQ8N6N2 239 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 KDF1Q8NAX2 398 aaPredicted RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 GLIS1Q8NBF1 620 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 SLC7A14Q8TBB6 771 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 ACTL9Q8TC94 416 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 SEC14L1Q92503 715 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 N4BP2L2Q92802 583 aaPredicted RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 ARL8AQ96BM9 186 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 SLC2A13Q96QE2 648 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 TMEM121Q9BTD3 319 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 MRPL9Q9BYD2 267 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 PCDH18Q9HCL0 1135 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 FAM114A2Q9NRY5 505 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 GRHL1Q9NZI5 618 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 CFAP73A6NFT4 308 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 C2CD2LO14523 706 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 ENDOD1O94919 500 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 MAP3K6O95382 1288 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 GAS8O95995 478 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 LTFP02788 710 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 CELA2BP08218 269 aaPredicted RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 ETS1P14921 441 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 PECAM1P16284 738 aaPredicted RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 L1CAMP32004 1257 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 ADCY8P40145 1251 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 CTCFP49711 727 aaPredicted RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 SLC5A3P53794 718 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 DEFB103AP81534 67 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 DEUP1Q05D60 604 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 MRPL58Q14197 206 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 BSPRYQ5W0U4 402 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms