RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ARMCX3Q9UH62 379 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 PLA2G4CQ9UP65 541 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 PCDHGB2Q9Y5G2 931 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 SRRM3A6NNA2 597 aaPredicted RBP18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 YJEFN3A6XGL0 299 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 E7ENQ6 273 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 IRAK2O43187 625 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 CBFA2T3O75081 653 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 CER1O95813 267 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 EPHX1P07099 455 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 RING1Q06587 406 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 PNOCQ13519 176 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 STILQ15468 1287 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 DCAF12L1Q5VU92 463 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 ANKRD40Q6AI12 368 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 AHI1Q8N157 1196 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 SLC35F5Q8WV83 523 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 ZCCHC14Q8WYQ9 949 aaKnown RBP18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 PCDHB9Q9Y5E1 797 aa18.24■□□□□ 0.51
SNRPA1-202ENST00000394082 SMC2O95347 1197 aa18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 IGLV3-27P01718 113 aa18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 CAPNS1P04632 268 aa18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 DAOAP59103 153 aa18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 NUGGCQ68CJ6 796 aa18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 ADIPOR2Q86V24 386 aa18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 UNC45BQ8IWX7 931 aa18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 ZCCHC9Q8N567 271 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 SORCS1Q8WY21 1168 aa18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 NDRG1Q92597 394 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 KIAA1522Q9P206 1035 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 SFMBT1Q9UHJ3 866 aa18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 DSPP15924 2871 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-202ENST00000394082 PKD1L2Q7Z442 2459 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 ATP5BP06576 529 aaKnown RBP18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 DLDP09622 509 aaKnown RBP18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 CD19P15391 556 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 PPP1R2P41236 205 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 MATKP42679 507 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 PMS1P54277 932 aaKnown RBP18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 CNGA2Q16280 664 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 PTPRNQ16849 979 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 FOXR2Q6PJQ5 311 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 CHCHD4Q8N4Q1 142 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 EDEM1Q92611 657 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 HSFY1Q96LI6 401 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 CAMK1GQ96NX5 476 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 LHX5Q9H2C1 402 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 GGA2Q9UJY4 613 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 PCOLCE2Q9UKZ9 415 aa18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 APOBEC2Q9Y235 224 aaKnown RBP18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 MUC22E2RYF6 1773 aaPredicted RBP18.22■□□□□ 0.51
SNRPA1-202ENST00000394082 P4HA2O15460 535 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 FTH1P19P0C7X4 201 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 PABPC1P11940 636 aaKnown RBP18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 SLC11A2P49281 568 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 FMO5P49326 533 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 AFF3P51826 1226 aaKnown RBP18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 PIK3R6Q5UE93 754 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 CHST9Q7L1S5 443 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 ELOA2Q8IYF1 753 aaPredicted RBP18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 ENGASEQ8NFI3 743 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 UBA3Q8TBC4 463 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 GOLGA1Q92805 767 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 CEP63Q96MT8 703 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 TIGD1Q96MW7 591 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 MIR1-1HGQ9H1L0 117 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 GAREM1Q9H706 876 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 ABCB8Q9NUT2 735 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 SUN2Q9UH99 717 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 EIF2B4Q9UI10 523 aaKnown RBP18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 HOOK1Q9UJC3 728 aaKnown RBP18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 SCML1Q9UN30 329 aa18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.21■□□□□ 0.51
SNRPA1-202ENST00000394082 FBXO21O94952 628 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 NNTQ13423 1086 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 ARID5BQ14865 1188 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 FNDC3BQ53EP0 1204 aaKnown RBP18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 PMF1Q6P1K2 205 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 TMEM270Q6UE05 265 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 KDM1BQ8NB78 822 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 BAHD1Q8TBE0 780 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 TFAP2BQ92481 460 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 SMARCE1Q969G3 411 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 DHTKD1Q96HY7 919 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 NT5C1BQ96P26 610 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 GDPD2Q9HCC8 539 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 TM7SF3Q9NS93 570 aa18.2■□□□□ 0.5
SNRPA1-202ENST00000394082 PSMA7O14818 248 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 FLRT2O43155 660 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 TSPAN3O60637 253 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 GABBR2O75899 941 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 DKK1O94907 266 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 HLA-EP13747 358 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 ACSL1P33121 698 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 GRIA4P48058 902 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 RPL34P49207 117 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 BNC1Q01954 994 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 CETN1Q12798 172 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 STIM1Q13586 685 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms