RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 PIGVQ9NUD9 493 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 ATG2BQ96BY7 2078 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 TYW5A2RUC4 315 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 C2CD4BA6NLJ0 364 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 GJB6O95452 261 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 PLEKP08567 350 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 CISD3P0C7P0 127 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 TFE3P19532 575 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 RRM1P23921 792 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 SLC6A4P31645 630 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 RFC1P35251 1148 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 CXCL12P48061 93 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 CXCR3P49682 368 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 CCR3P51677 355 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 ZNF75DP51815 510 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 PTPN5P54829 565 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 MESP2Q0VG99 397 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 ANGPT1Q15389 498 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 MS4A13Q5J8X5 152 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 MPP7Q5T2T1 576 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 OTUD1Q5VV17 481 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 DCUN1D2Q6PH85 259 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 WDR59Q6PJI9 974 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 CHSY1Q86X52 802 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 TERB1Q8NA31 727 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 TRIM11Q96F44 468 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 P2RY11Q96G91 374 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 DNAJC7Q99615 494 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 ISCUQ9H1K1 167 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 PARVAQ9NVD7 372 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 CALCOCO1Q9P1Z2 691 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 XPO7Q9UIA9 1087 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 CACNA1IQ9P0X4 2223 aa19.69■□□□□ 0.74
PDLIM7-204ENST00000393546 TCRBV5S1A1TA0A578 114 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 CHURC1-FNTBB4DL54 471 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 AKR1B15C9JRZ8 316 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 TRIM24O15164 1050 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 TBL1XO60907 577 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 ENDOD1O94919 500 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 TACR2P21452 398 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 GPD1P21695 349 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 HOXD9P28356 352 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 RDXP35241 583 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 PTPN9P43378 593 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 ADKP55263 362 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 SEC13P55735 322 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 MRPS21P82921 87 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 ATP11AP98196 1134 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 ARID5BQ14865 1188 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 CCDC14Q49A88 953 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 RAP1GAP2Q684P5 730 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 CNGA4Q8IV77 575 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 LGI2Q8N0V4 545 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 HJURPQ8NCD3 748 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 ADAM33Q9BZ11 813 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 TKTL2Q9H0I9 626 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 ARHGEF38Q9NXL2 777 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 ARHGAP20Q9P2F6 1191 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 RAPGEFL1Q9UHV5 662 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 SLC27A6Q9Y2P4 619 aa19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 ARIH1Q9Y4X5 557 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-204ENST00000393546 F5H5T6 163 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 MFAP3LO75121 409 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 MYBL1P10243 752 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 CSTF1Q05048 431 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 TCF15Q12870 199 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 TBX2Q13207 712 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 CDO1Q16878 200 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 C2orf27AQ580R0 203 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 C10orf76Q5T2E6 689 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 BNIPLQ7Z465 357 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 DNAAF5Q86Y56 855 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 CCDC117Q8IWD4 279 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 ZNF557Q8N988 423 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 RPLP0P6Q8NHW5 317 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 USP33Q8TEY7 942 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 MRFAP1L1Q96HT8 127 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 ABHD10Q9NUJ1 306 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 STIM2Q9P246 746 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 CNOT8Q9UFF9 292 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 FBXO4Q9UKT5 387 aa19.67■□□□□ 0.74
PDLIM7-204ENST00000393546 A0A087X0T9 212 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 H0Y858 1186 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 PAGE1O75459 146 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 ADCY5O95622 1261 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 FAM228BP0C875 321 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 DESP17661 470 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 EIF4A3P38919 411 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 SGSHP51688 502 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 ATXN1P54253 815 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 MAMLD1Q13495 774 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 C15orf59Q2T9L4 293 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 PPP1R15BQ5SWA1 713 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 CCDC122Q5T0U0 273 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 ACBD5Q5T8D3 534 aaPredicted RBP19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 PLEKHA7Q6IQ23 1121 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 ALKBH5Q6P6C2 394 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 STRADAQ7RTN6 431 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 SFTPA1Q8IWL2 248 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 MAML2Q8IZL2 1156 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms