RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TNFRSF4P43489 277 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 GABRB2P47870 512 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 SLC11A2P49281 568 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 IRAK1P51617 712 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 RPS24P62847 133 aaKnown RBP7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TPM4P67936 248 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 CDK17Q00537 523 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 PPP2R5DQ14738 602 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 CLEC16AQ2KHT3 1053 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 MPPE1Q53F39 396 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 PIK3R6Q5UE93 754 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TMEM215Q68D42 235 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 ANO7Q6IWH7 933 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZC3H14Q6PJT7 736 aaKnown RBP7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 PRR23BQ6ZRT6 265 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 BEND5Q7L4P6 421 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 LONP2Q86WA8 852 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 CHSY1Q86X52 802 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF677Q86XU0 584 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 UNC45BQ8IWX7 931 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 LGI2Q8N0V4 545 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF513Q8N8E2 541 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TSTD1Q8NFU3 115 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 JOSD2Q8TAC2 188 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 ACDQ96AP0 544 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TMA16Q96EY4 203 aaKnown RBP7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TBCBQ99426 244 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 AGPAT1Q99943 283 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TRIM62Q9BVG3 475 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TTYH3Q9C0H2 523 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 SLC6A17Q9H1V8 727 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TSPY26PQ9H489 355 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 ANLNQ9NQW6 1124 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 PIGVQ9NUD9 493 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 ASNSD1Q9NWL6 643 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TAS2R14Q9NYV8 317 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 STOML2Q9UJZ1 356 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 FBXO10Q9UK96 956 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 MMP17Q9ULZ9 603 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 PCDHGA2Q9Y5H1 932 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 WDR87Q6ZQQ6 2873 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 A0A1W2PQC6 194 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 TCRBV21S2A2A0A5A6 115 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 KCNU1A8MYU2 1149 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 ADCY5O95622 1261 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 APBB3O95704 486 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 LATS1O95835 1130 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 LMNAP02545 664 aaKnown RBP7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 APOEP02649 317 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 SKILP12757 684 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 HOXB2P14652 356 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 FERP16591 822 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 TACR2P21452 398 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 MMP8P22894 467 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CD70P32970 193 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 NOS2P35228 1153 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 PBX1P40424 430 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 MATKP42679 507 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 NSFP46459 744 aaKnown RBP7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 UBASH3AP57075 661 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 MRPS21P82921 87 aaKnown RBP7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 ATP11AP98196 1134 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CENPCQ03188 943 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 RING1Q06587 406 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 PTP4A2Q12974 167 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 NNTQ13423 1086 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 EIF4EBP2Q13542 120 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 ASIC2Q16515 512 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CRY1Q16526 586 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CDO1Q16878 200 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 C15orf59Q2T9L4 293 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 FSCBQ5H9T9 825 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 MS4A13Q5J8X5 152 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 SH3PXD2AQ5TCZ1 1133 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 KIAA1211LQ6NV74 962 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 LRSAM1Q6UWE0 723 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 IRF2BP2Q7Z5L9 587 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 ANKS1BQ7Z6G8 1248 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 C14orf80Q86SX3 495 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 WDR5BQ86VZ2 330 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CACUL1Q86Y37 369 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CHPFQ8IZ52 775 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CARNMT1Q8N4J0 409 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 DCLK2Q8N568 766 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 FRMD1Q8N878 549 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF366Q8N895 744 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 PDCD7Q8N8D1 485 aaKnown RBP7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 SUMF1Q8NBK3 374 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF397Q8NF99 534 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 MDGA1Q8NFP4 955 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CYB5D2Q8WUJ1 264 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CPLX3Q8WVH0 158 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 RNF34Q969K3 372 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CFAP57Q96MR6 1250 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 NPY6RQ99463 290 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 SYT11Q9BT88 431 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 CIPCQ9C0C6 399 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 HAUS4Q9H6D7 363 aa7.95□□□□□ -1.14
HMGB3P1-201ENST00000393368 SCUBE2Q9NQ36 999 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms